RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 HAT1O14929 419 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 KIF1CO43896 1103 aaKnown RBP12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 OR4F21O95013 312 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 FTH1P19P0C7X4 201 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 UROSP10746 265 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 HGFP14210 728 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 PVRP15151 417 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 NELFEP18615 380 aaKnown RBP12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 SCTRP47872 440 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 GABRA4P48169 554 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 HK2P52789 917 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 RPS15AP62244 130 aaKnown RBP12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 INSM1Q01101 510 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 ZIC1Q15915 447 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 TUBB8Q3ZCM7 444 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 KANK2Q63ZY3 851 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 TMIGD1Q6UXZ0 262 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 FAM20CQ8IXL6 584 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 D2HGDHQ8N465 521 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 TBC1D19Q8N5T2 526 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 TTLQ8NG68 377 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 WDR20Q8TBZ3 569 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 REPS1Q96D71 796 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 CCDC74BQ96LY2 380 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 TMEM74Q96NL1 305 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 CDK15Q96Q40 435 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 ZFYVE21Q9BQ24 234 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 RTKNQ9BST9 563 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 ILKAPQ9H0C8 392 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 TNFRSF12AQ9NP84 129 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 ADGRE2Q9UHX3 823 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 APOBEC2Q9Y235 224 aaKnown RBP12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 RNF11Q9Y3C5 154 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 PCDHGA11Q9Y5H2 935 aa12.03□□□□□ -0.48
TRAPPC12-218ENST00000479897 DMXL1Q9Y485 3027 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 SERTM1A2A2V5 107 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 SLC9B1P1A6NJY1 282 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 TMX2-CTNND1H3BSU7 103 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 AZIN1O14977 448 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 NRP2O60462 931 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 CTSVO60911 334 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 RASSF9O75901 435 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 CAPN1P07384 714 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 MPSTP25325 297 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 AHRP35869 848 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 ARL1P40616 181 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 MLLT3P42568 568 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 HSD11B2P80365 405 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 HIST2H2ACQ16777 129 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 SH2D4BQ5SQS7 431 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 HIST2H2AA3Q6FI13 130 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 MED27Q6P2C8 311 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 ADCK2Q7Z695 626 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 SLCO6A1Q86UG4 719 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 CLYBLQ8N0X4 340 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 DNAJC22Q8N4W6 341 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 ZNF781Q8N8C0 355 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 CDYL2Q8N8U2 506 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 DCBLD1Q8N8Z6 715 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 USP7Q93009 1102 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 FAR2Q96K12 515 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 ZNF285Q96NJ3 590 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 RHBGQ9H310 441 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 SYNDIG1Q9H7V2 258 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 ZNF395Q9H8N7 513 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 PDE7BQ9NP56 450 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 ZDHHC2Q9UIJ5 367 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 SNX6Q9UNH7 406 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 PCDHGA4Q9Y5G9 962 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 AP1M2Q9Y6Q5 423 aa12.02□□□□□ -0.49
TRAPPC12-218ENST00000479897 SRRM3A6NNA2 597 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 MAP3K7O43318 606 aa12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 EDF1O60869 148 aaKnown RBP12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 KCNK5O95279 499 aa12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 KRT6AP02538 564 aa12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 KRT6BP04259 564 aa12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 HSD3B1P14060 373 aa12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 HSD3B2P26439 372 aa12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 HMOX2P30519 316 aa12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 PLA2G5P39877 138 aa12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 BCL6P41182 706 aa12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 PIK3CBP42338 1070 aa12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 KRT6CP48668 564 aa12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 RPL14P50914 215 aaKnown RBP12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 NOVA1P51513 510 aaKnown RBP12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 INHBCP55103 352 aa12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 FOXA1P55317 472 aa12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 SIM1P81133 766 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 MEF2AQ02078 507 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 ZRSR2Q15696 482 aaKnown RBP12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 CPSF6Q16630 551 aaKnown RBP eCLIP12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 UGT3A2Q3SY77 523 aa12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 ZC3H12BQ5HYM0 836 aaKnown RBP12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 FRG2Q64ET8 278 aa12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 MYLK4Q86YV6 388 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 CRLF3Q8IUI8 442 aa12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 AFAP1L2Q8N4X5 818 aa12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 ANKRD53Q8N9V6 530 aa12.01□□□□□ -0.49
TRAPPC12-218ENST00000479897 MFSD9Q8NBP5 474 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms