RNA–Protein interactions for RNA: ENST00000478216.1

RC3H2-208, Transcript of ring finger and CCCH-type domains 2, human

TSL 3

Gene RC3H2, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RC3H2-208	ENST00000478216	STATH	P02808	62 aa		13.43	□□□□□ -0.26
RC3H2-208	ENST00000478216	CD96	P40200	585 aa		13.43	□□□□□ -0.26
RC3H2-208	ENST00000478216	EXT1	Q16394	746 aa		13.43	□□□□□ -0.26
RC3H2-208	ENST00000478216	CEP128	Q6ZU80	1094 aa		13.43	□□□□□ -0.26
RC3H2-208	ENST00000478216	ZNF534	Q76KX8	674 aa		13.43	□□□□□ -0.26
RC3H2-208	ENST00000478216	PPHLN1	Q8NEY8	458 aa	Known RBP	13.43	□□□□□ -0.26
RC3H2-208	ENST00000478216	MCOLN3	Q8TDD5	553 aa		13.43	□□□□□ -0.26
RC3H2-208	ENST00000478216	SMPDL3A	Q92484	453 aa		13.43	□□□□□ -0.26
RC3H2-208	ENST00000478216	ZNF559	Q9BR84	538 aa		13.43	□□□□□ -0.26
RC3H2-208	ENST00000478216	TMEM121	Q9BTD3	319 aa		13.43	□□□□□ -0.26
RC3H2-208	ENST00000478216	HCN3	Q9P1Z3	774 aa		13.43	□□□□□ -0.26
RC3H2-208	ENST00000478216	FOXO6	A8MYZ6	492 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	FOXS1	O43638	330 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	TPO	P07202	933 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	EZR	P15311	586 aa	Known RBP	13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	ADRA1D	P25100	572 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	PSMA3	P25788	255 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	GDF10	P55107	478 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	ACTN3	Q08043	901 aa	Predicted RBP	13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	MYBPH	Q13203	477 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	ANKRD20A4	Q4UJ75	823 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	THEMIS2	Q5TEJ8	643 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	MEI1	Q5TIA1	1274 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	PAQR7	Q86WK9	346 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	DOLPP1	Q86YN1	238 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	VSTM4	Q8IW00	320 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	OR9A4	Q8NGU2	314 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	FAM136A	Q96C01	138 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	SCMH1	Q96GD3	660 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	ZNF778	Q96MU6	729 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	CYTH2	Q99418	400 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	FAM114A2	Q9NRY5	505 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	LRFN1	Q9P244	771 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	PCDHA13	Q9Y5I0	950 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	ITPR3	Q14573	2671 aa		13.42	□□□□□ -0.26
RC3H2-208	ENST00000478216	ASPDH	A6ND91	283 aa		13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	SOWAHD	A6NJG2	315 aa		13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	ZNF839	A8K0R7	811 aa		13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	ERI2	A8K979	691 aa	Known RBP	13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	TFEC	O14948	347 aa	Predicted RBP	13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	CD3EAP	O15446	510 aa	Known RBP	13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	P2RX6	O15547	441 aa		13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	CDC40	O60508	579 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	SYF2	O95926	243 aa	Known RBP	13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	SP1	P08047	785 aa		13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	DRD2	P14416	443 aa		13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	XCR1	P46094	333 aa		13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	AGTR2	P50052	363 aa		13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	PPP2R2A	P63151	447 aa		13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	ICE2	Q659A1	982 aa		13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	SLC25A25	Q6KCM7	469 aa		13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	ANKRD37	Q7Z713	158 aa		13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	PLD3	Q8IV08	490 aa		13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	OR9A1P	Q8NGU1	263 aa		13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	TRIM51	Q9BSJ1	452 aa		13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	RBCK1	Q9BYM8	510 aa		13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	TCAF1	Q9Y4C2	921 aa		13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	CACNA1C	Q13936	2221 aa		13.41	□□□□□ -0.26
RC3H2-208	ENST00000478216	NF1	P21359	2839 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	NKX2-6	A6NCS4	301 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	NDC80	O14777	642 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	HAT1	O14929	419 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	SLC25A12	O75746	678 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	ZWINT	O95229	277 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	PTGS2	P35354	604 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	EFNA3	P52797	238 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	PTK6	Q13882	451 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	FAM53B	Q14153	422 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	SFT2D3	Q587I9	215 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	PAPD4	Q6PIY7	484 aa	Known RBP	13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	CD163	Q86VB7	1156 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	LRRC6	Q86X45	466 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	SIAH3	Q8IW03	269 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	CPSF7	Q8N684	471 aa	Known RBP	13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	PPFIBP2	Q8ND30	876 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	CHDH	Q8NE62	594 aa	Predicted RBP	13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	OR51Q1	Q8NH59	317 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	ZCCHC10	Q8TBK6	192 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	M1AP	Q8TC57	530 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	ASB5	Q8WWX0	329 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	TMEM125	Q96AQ2	219 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	OR2A5	Q96R48	311 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	DMRTA2	Q96SC8	542 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	LPAR4	Q99677	370 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	EBNA1BP2	Q99848	306 aa	Known RBP	13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	SYNPO2L	Q9H987	977 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	RIMKLB	Q9ULI2	386 aa		13.4	□□□□□ -0.26
RC3H2-208	ENST00000478216	DCHS2	Q6V1P9	2916 aa		13.39	□□□□□ -0.27
RC3H2-208	ENST00000478216	OR2W5	A6NFC9	320 aa		13.39	□□□□□ -0.27
RC3H2-208	ENST00000478216	USP27X	A6NNY8	438 aa		13.39	□□□□□ -0.27
RC3H2-208	ENST00000478216	ARHGEF33	A8MVX0	844 aa		13.39	□□□□□ -0.27
RC3H2-208	ENST00000478216		H0YIG0	161 aa		13.39	□□□□□ -0.27
RC3H2-208	ENST00000478216	SMAP	O00193	183 aa		13.39	□□□□□ -0.27
RC3H2-208	ENST00000478216	MAN1A2	O60476	641 aa		13.39	□□□□□ -0.27
RC3H2-208	ENST00000478216	CDC123	O75794	336 aa	Predicted RBP	13.39	□□□□□ -0.27
RC3H2-208	ENST00000478216	IPO7	O95373	1038 aa	Known RBP	13.39	□□□□□ -0.27
RC3H2-208	ENST00000478216	IFNB1	P01574	187 aa		13.39	□□□□□ -0.27
RC3H2-208	ENST00000478216	CAT	P04040	527 aa	Known RBP	13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms