RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 CDH17Q12864 832 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 DMP1Q13316 513 aaPredicted RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 PPIGQ13427 754 aaKnown RBP eCLIP3.41□□□□□ -1.863e-34■■□□□ 12.6
FNDC3B-209ENST00000478016 TSTA3Q13630 321 aaPredicted RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 PIGHQ14442 188 aaPredicted RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 MFSD13AQ14CX5 517 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 SLC36A3Q495N2 470 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 TRIM60Q495X7 471 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 CDKL4Q5MAI5 379 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 SPANXN2Q5MJ10 180 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 CARD17Q5XLA6 110 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 RAET1GQ6H3X3 334 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 RGS7BPQ6MZT1 257 aaPredicted RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 FUT10Q6P4F1 479 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 CRELD2Q6UXH1 353 aaPredicted RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 STOX1Q6ZVD7 989 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 ADAMTSL2Q86TH1 951 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 LHFPL3Q86UP9 236 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 PPP1R3BQ86XI6 285 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 SLC13A5Q86YT5 568 aaPredicted RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 CFAP206Q8IYR0 622 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 KATNAL2Q8IYT4 538 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 GUF1Q8N442 669 aaKnown RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 ZNF366Q8N895 744 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 VGLL2Q8N8G2 317 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 PDPRQ8NCN5 879 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 SLC17A8Q8NDX2 589 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 TMEM104Q8NE00 496 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 GPRC5AQ8NFJ5 357 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 OR6Q1Q8NGQ2 317 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 OR52N1Q8NH53 320 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 NCOA7Q8NI08 942 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 ST7LQ8TDW4 575 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 NEU4Q8WWR8 484 aaPredicted RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 NELFBQ8WX92 580 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 RLN3Q8WXF3 142 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 POMGNT1Q8WZA1 660 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 SNX19Q92543 992 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 MRPS27Q92552 414 aaKnown RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 GTF3AQ92664 365 aaKnown RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 ESR2Q92731 530 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 RAB1CQ92928 201 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 HAVCR1Q96D42 359 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 TMCO6Q96DC7 493 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 ERLEC1Q96DZ1 483 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 SNX22Q96L94 193 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 GDAP1L1Q96MZ0 367 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 LRFN5Q96NI6 719 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 QRFPRQ96P65 431 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 TSC22D3Q99576 134 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 ADAM2Q99965 735 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 C1orf43Q9BWL3 253 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 PHF7Q9BWX1 381 aaPredicted RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 MRPL13Q9BYD1 178 aaKnown RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 PARD6GQ9BYG4 376 aaPredicted RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 PANK2Q9BZ23 570 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 MAGEB5Q9BZ81 275 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 DPH1Q9BZG8 443 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 SLC22A4Q9H015 551 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 TOLLIPQ9H0E2 274 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 SIK2Q9H0K1 926 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 OR51B6Q9H340 312 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 RIMS4Q9H426 269 aaPredicted RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 DPEP3Q9H4B8 488 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 TAF1DQ9H5J8 278 aaPredicted RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 PANK3Q9H999 370 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 FN3KRPQ9HA64 309 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 GALNT9Q9HCQ5 603 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 ADAP2Q9NPF8 381 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 SLAMF7Q9NQ25 335 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 PANK4Q9NVE7 773 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 EXD2Q9NVH0 621 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 FAM118AQ9NWS6 357 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 GDE1Q9NZC3 331 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 ANKFY1Q9P2R3 1169 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 DKK2Q9UBU2 259 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 LPAR3Q9UBY5 353 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 ARMCX3Q9UH62 379 aaPredicted RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 LIMA1Q9UHB6 759 aaKnown RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 IL20RAQ9UHF4 553 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 CYB5R1Q9UHQ9 305 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 CPA4Q9UI42 421 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 NAGKQ9UJ70 344 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 PADI1Q9ULC6 663 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 CDC14AQ9UNH5 594 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 NIP7Q9Y221 180 aaKnown RBP eCLIP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 NEU2Q9Y3R4 380 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 INSL6Q9Y581 213 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 GMPPBQ9Y5P6 360 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 NOS1P29475 1434 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 ANKRD50Q9ULJ7 1429 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 SPHKAPQ2M3C7 1700 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 AOX1Q06278 1338 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 SPATA31A1Q5TZJ5 1347 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 RPRD2Q5VT52 1461 aaKnown RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 COL16A1Q07092 1604 aaPredicted RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 NRXN3Q9Y4C0 1643 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 PNMA6EA0A0J9YXQ4 647 aa3.4□□□□□ -1.87
FNDC3B-209ENST00000478016 CCDC195A0A1B0GUA6 201 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms