RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 PSTKQ8IV42 348 aaKnown RBP12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 CLEC4CQ8WTT0 213 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 FBLIM1Q8WUP2 373 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 HEXDCQ8WVB3 486 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 SMARCD1Q96GM5 515 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 RNF145Q96MT1 663 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 FAM129BQ96TA1 746 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 ACBD6Q9BR61 282 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 SLC25A23Q9BV35 468 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 C3orf14Q9HBI5 128 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 ZBTB20Q9HC78 741 aaPredicted RBP12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 CRTAC1Q9NQ79 661 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 EXD2Q9NVH0 621 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 SAE1Q9UBE0 346 aaPredicted RBP12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 MGAT4BQ9UQ53 548 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 VPS9D1Q9Y2B5 631 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 A0A075B6Q4 140 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 A0A0G2JPF8 293 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 A0A1W2PQ45 241 aaPredicted RBP12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 A0A1W2PQY0 241 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 HNRNPCL3B7ZW38 293 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 CHADO15335 359 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 FKTNO75072 461 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 URODP06132 367 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 ADRB1P08588 477 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 CSH1P0DML2 217 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 CSH2P0DML3 217 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 HNRNPCL4P0DMR1 293 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 KPNA2P52292 529 aaKnown RBP12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 BCAR1P56945 870 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 CXCR4P61073 352 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 RRAS2P62070 204 aaPredicted RBP12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 FGL2Q14314 439 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 TRAM2Q15035 370 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 NOMO1Q15155 1222 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 DPYSL2Q16555 572 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 CTU2Q2VPK5 515 aaKnown RBP12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 GLYATQ6IB77 296 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 DARS2Q6PI48 645 aaKnown RBP12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 CCDC149Q6ZUS6 474 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 SLC24A5Q71RS6 500 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 THEM5Q8N1Q8 247 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 GHDCQ8N2G8 530 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 PLD5Q8N7P1 536 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 FCGR1BQ92637 280 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 C19orf60Q96EN9 201 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 NECTIN4Q96NY8 510 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 QRSL1Q9H0R6 528 aaKnown RBP12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 OSGEPL1Q9H4B0 414 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 DYRK4Q9NR20 520 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 CACNG4Q9UBN1 327 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 MAB21L2Q9Y586 359 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 TIMM13Q9Y5L4 95 aaPredicted RBP12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 A0A1W2PPL8 197 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 GRXCR2A6NFK2 248 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 PTGES3LE9PB15 166 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 NEMP1O14524 444 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 MYL12BO14950 172 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 PRKCGP05129 697 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 MYL12AP19105 171 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 GRK4P32298 578 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 RORAP35398 523 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 ALDH9A1P49189 494 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 GLUD2P49448 558 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 SULT1E1P49888 294 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 TKTL1P51854 596 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 ATP12AP54707 1039 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 ISL1P61371 349 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 SLC35F1Q5T1Q4 408 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 AADACL4Q5VUY2 407 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 LHX8Q68G74 356 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 LAIR2Q6ISS4 152 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 ANKRD54Q6NXT1 300 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 TRIM48Q8IWZ4 208 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 DEFB106AQ8N104 65 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 KRT78Q8N1N4 520 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 EIF4E3Q8N5X7 224 aaKnown RBP12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 OR6C4Q8NGE1 309 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 ELP5Q8TE02 316 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 PCED1BQ96HM7 432 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 HOPXQ9BPY8 73 aaPredicted RBP12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 COPS4Q9BT78 406 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 PIGUQ9H490 435 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 DHX35Q9H5Z1 703 aaKnown RBP12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 POPDC2Q9HBU9 364 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 ERVK13-1Q9NX77 482 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 PCDHB5Q9Y5E4 795 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 PIAS3Q9Y6X2 628 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 ZFC3H1O60293 1989 aaKnown RBP12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 MYBPHLA2RUH7 354 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 M0QZQ0 153 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 ARVCFO00192 962 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 TERTO14746 1132 aaKnown RBP12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 MRASO14807 208 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 PPM1DO15297 605 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 PRSS23O95084 383 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 RNF224P0DH78 156 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 ATP5OP48047 213 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 PREPP48147 710 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 SLC7A2P52569 658 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms