RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 NEURL2Q9BR09 285 aa3.75□□□□□ -1.81
UBR3-209ENST00000477461 MTG1Q9BT17 334 aaPredicted RBP3.75□□□□□ -1.81
UBR3-209ENST00000477461 ANP32EQ9BTT0 268 aa3.75□□□□□ -1.81
UBR3-209ENST00000477461 UPF3AQ9H1J1 476 aaKnown RBP3.75□□□□□ -1.81
UBR3-209ENST00000477461 TNMDQ9H2S6 317 aa3.75□□□□□ -1.81
UBR3-209ENST00000477461 GOLPH3LQ9H4A5 285 aa3.75□□□□□ -1.81
UBR3-209ENST00000477461 ANKEF1Q9NU02 776 aa3.75□□□□□ -1.81
UBR3-209ENST00000477461 SETD4Q9NVD3 440 aa3.75□□□□□ -1.81
UBR3-209ENST00000477461 ERAP1Q9NZ08 941 aa3.75□□□□□ -1.81
UBR3-209ENST00000477461 OGFRQ9NZT2 677 aa3.75□□□□□ -1.81
UBR3-209ENST00000477461 ZNF624Q9P2J8 865 aaPredicted RBP3.75□□□□□ -1.81
UBR3-209ENST00000477461 FBXL17Q9UF56 701 aa3.75□□□□□ -1.81
UBR3-209ENST00000477461 GOLGB1Q14789 3259 aaKnown RBP3.75□□□□□ -1.81
UBR3-209ENST00000477461 ARID2Q68CP9 1835 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 IGSF9BQ9UPX0 1349 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 IGKV6D-21A0A0A0MT36 114 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 FSD2A1L4K1 749 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 CTAGE9A4FU28 777 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 EIF4E1BA6NMX2 242 aaKnown RBP3.74□□□□□ -1.81
UBR3-209ENST00000477461 PTGES3LE9PB15 166 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 OGG1O15527 345 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 SYNGR3O43761 229 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 TBCAO75347 108 aaKnown RBP3.74□□□□□ -1.81
UBR3-209ENST00000477461 CABYRO75952 493 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 LETM1O95202 739 aaPredicted RBP3.74□□□□□ -1.81
UBR3-209ENST00000477461 LYPLA2O95372 231 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 ASGR1P07306 291 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 CTAGE8P0CG41 777 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 ZNF23P17027 643 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 CAPN2P17655 700 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 PON1P27169 355 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 GARSP41250 739 aaKnown RBP3.74□□□□□ -1.81
UBR3-209ENST00000477461 CAMPP49913 170 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 CLDN20P56880 219 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 GNB1P62873 340 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 ASIC1P78348 528 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 CAMK4Q16566 473 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 UGCGQ16739 394 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 KLHL40Q2TBA0 621 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 ZSCAN23Q3MJ62 389 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 RAB6CQ53S08 254 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 CCDC183Q5T5S1 534 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 NSUN5P2Q63ZY6 315 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 CAVIN1Q6NZI2 390 aaKnown RBP3.74□□□□□ -1.81
UBR3-209ENST00000477461 CXCL17Q6UXB2 119 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 Q75L30 129 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 SDCCAG8Q86SQ7 713 aaPredicted RBP3.74□□□□□ -1.81
UBR3-209ENST00000477461 CTAGE4Q8IX94 777 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 CCDC65Q8IXS2 484 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 GCSAMQ8N6F7 178 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 SYT2Q8N9I0 419 aaPredicted RBP3.74□□□□□ -1.81
UBR3-209ENST00000477461 OR8K5Q8NH50 307 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 HM13Q8TCT9 377 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 ATP8B4Q8TF62 1192 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 CEP170P1Q96L14 293 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 GLT1D1Q96MS3 346 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 JPH2Q9BR39 696 aaPredicted RBP3.74□□□□□ -1.81
UBR3-209ENST00000477461 C16orf70Q9BSU1 422 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 TIPINQ9BVW5 301 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 RAB6CQ9H0N0 254 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 GHITMQ9H3K2 345 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 PIGMQ9H3S5 423 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 CLSTN2Q9H4D0 955 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 EXOC1Q9NV70 894 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 RMND1Q9NWS8 449 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 NSMCE4AQ9NXX6 385 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 CMAHPQ9Y471 501 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 COL1A2P08123 1366 aa3.74□□□□□ -1.81
UBR3-209ENST00000477461 NRCAMQ92823 1304 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 SCN10AQ9Y5Y9 1956 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 A0A087WWV3 80 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 A0A0U1RQG5 324 aaPredicted RBP3.73□□□□□ -1.81
UBR3-209ENST00000477461 ZCWPW2A0A1B0GU75 182 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 A6NCN8 305 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 DNM1LO00429 736 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 EIF3DO15371 548 aaKnown RBP eCLIP3.73□□□□□ -1.81
UBR3-209ENST00000477461 MAGEB2O15479 319 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 CTSVO60911 334 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 GPC4O75487 556 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 ZNF821O75541 412 aaPredicted RBP3.73□□□□□ -1.81
UBR3-209ENST00000477461 RPN1P04843 607 aaKnown RBP3.73□□□□□ -1.81
UBR3-209ENST00000477461 FAM106CPP0CH98 169 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 SMIM10L2AP0DMW4 78 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 SMIM10L2BP0DMW5 78 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 GAP43P17677 238 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 CYP11B2P19099 503 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 TMOD1P28289 359 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 HADHAP40939 763 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 ARCN1P48444 511 aaKnown RBP3.73□□□□□ -1.81
UBR3-209ENST00000477461 ACLYP53396 1101 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 CTSCP53634 463 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 SLC12A3P55017 1021 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 PSMC6P62333 389 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 MRPS5P82675 430 aaKnown RBP3.73□□□□□ -1.81
UBR3-209ENST00000477461 GAGE5Q13069 117 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 GAGE6Q13070 117 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 PNOCQ13519 176 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 ITGA7Q13683 1181 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 EMC2Q15006 297 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 MEA1Q16626 185 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms