RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 VEGFBP49765 207 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 CCR4P51679 360 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 TGM3Q08188 693 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 GRIN2CQ14957 1233 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 LCN8Q6JVE9 175 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 SLC39A5Q6ZMH5 540 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 ERI1Q8IV48 349 aaKnown RBP10.68□□□□□ -0.7
COL27A1-204ENST00000477421 HDDC3Q8N4P3 179 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 NFKBIDQ8NI38 313 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 BORCS5Q969J3 196 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 BIRC8Q96P09 236 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 SLC29A3Q9BZD2 475 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 PHPT1Q9NRX4 125 aaPredicted RBP10.68□□□□□ -0.7
COL27A1-204ENST00000477421 THUMPD1Q9NXG2 353 aaKnown RBP10.68□□□□□ -0.7
COL27A1-204ENST00000477421 SEC16AO15027 2179 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 DOCK1Q14185 1865 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 ZNFX1Q9P2E3 1918 aaKnown RBP10.68□□□□□ -0.7
COL27A1-204ENST00000477421 PIPSLA2A3N6 862 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 MATN4O95460 622 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 PRLP01236 227 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 C8orf89P0DMQ9 161 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 POLR2IP36954 125 aaKnown RBP10.68□□□□□ -0.7
COL27A1-204ENST00000477421 RPL3P39023 403 aaKnown RBP10.68□□□□□ -0.7
COL27A1-204ENST00000477421 GRM2Q14416 872 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 RAB39AQ14964 217 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 PON2Q15165 354 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 ATP6AP1Q15904 470 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 TYSND1Q2T9J0 566 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 IFI44LQ53G44 452 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 PRAMEF14Q5SWL7 426 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 PRAMEF13Q5VWM6 474 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 CXorf57Q6NSI4 855 aaKnown RBP10.68□□□□□ -0.7
COL27A1-204ENST00000477421 TMIGD1Q6UXZ0 262 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 GAREM2Q75VX8 874 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 LGI4Q8N135 537 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 CAMKK1Q8N5S9 505 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 NETO1Q8TDF5 533 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 ISOC1Q96CN7 298 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 MAGEB10Q96LZ2 347 aaPredicted RBP10.68□□□□□ -0.7
COL27A1-204ENST00000477421 C8orf4Q9NR00 106 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 KLHL1Q9NR64 748 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 TRNAU1APQ9NX07 287 aaKnown RBP10.68□□□□□ -0.7
COL27A1-204ENST00000477421 C5AR2Q9P296 337 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 SLC9A8Q9Y2E8 581 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 QSER1Q2KHR3 1735 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 IGLV3-10A0A075B6K4 115 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 E7EQ34 232 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 CCNDBP1O95273 360 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 DNTTP04053 509 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 HPGDP15428 266 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 PAICSP22234 425 aaKnown RBP10.68□□□□□ -0.7
COL27A1-204ENST00000477421 HK3P52790 923 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 UGT2B15P54855 530 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 RAB8AP61006 207 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 SCARB2Q14108 478 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 DPY19L1Q2PZI1 675 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 EPHX4Q8IUS5 362 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 DEPDC4Q8N2C3 294 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 CPA6Q8N4T0 437 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 TMEM145Q8NBT3 493 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 OR10G2Q8NGC3 310 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 FIBINQ8TAL6 211 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 TSPEARQ8WU66 669 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 MARCH7Q9H992 704 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 ELOVL2Q9NXB9 296 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 LHX3Q9UBR4 397 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 ATP6V1HQ9UI12 483 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 ERVW-1Q9UQF0 538 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 PCDHB3Q9Y5E6 796 aa10.68□□□□□ -0.7
COL27A1-204ENST00000477421 TFECO14948 347 aaPredicted RBP10.67□□□□□ -0.7
COL27A1-204ENST00000477421 ADAMDEC1O15204 470 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 ZNF8P17098 575 aaPredicted RBP10.67□□□□□ -0.7
COL27A1-204ENST00000477421 CST5P28325 142 aaPredicted RBP10.67□□□□□ -0.7
COL27A1-204ENST00000477421 SLC39A11Q8N1S5 342 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 ZNF607Q96SK3 696 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 P2RY13Q9BPV8 354 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 PCDHGB5Q9Y5G0 923 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 ZW10O43264 779 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 AIREO43918 545 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 MFN2O95140 757 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 RASAL1O95294 804 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 BCHEP06276 602 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 IMPDH2P12268 514 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 BMP2P12643 396 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 KDELR2P33947 212 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 GSTM5P46439 218 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 TAGLNQ01995 201 aaKnown RBP10.67□□□□□ -0.7
COL27A1-204ENST00000477421 RNF130Q86XS8 419 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 NPAS3Q8IXF0 933 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 TCEAL8Q8IYN2 117 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 DOK4Q8TEW6 326 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 CMTM7Q96FZ5 175 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 NDOR1Q9UHB4 597 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 MAPRE3Q9UPY8 281 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 SNTNA6NMZ2 147 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 CD36P16671 472 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 HMGA1P17096 107 aaKnown RBP10.67□□□□□ -0.7
COL27A1-204ENST00000477421 IDSP22304 550 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 JAK1P23458 1154 aa10.67□□□□□ -0.7
COL27A1-204ENST00000477421 RYKP34925 604 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms