RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 VWA2Q5GFL6 755 aa14.8□□□□□ -0.04
COMMD6-209ENST00000477377 UBAP2Q5T6F2 1119 aaKnown RBP14.8□□□□□ -0.04
COMMD6-209ENST00000477377 THEMIS2Q5TEJ8 643 aa14.8□□□□□ -0.04
COMMD6-209ENST00000477377 GARNL3Q5VVW2 1013 aa14.8□□□□□ -0.04
COMMD6-209ENST00000477377 KIRREL2Q6UWL6 708 aa14.8□□□□□ -0.04
COMMD6-209ENST00000477377 SHISA6Q6ZSJ9 500 aa14.8□□□□□ -0.04
COMMD6-209ENST00000477377 STT3BQ8TCJ2 826 aa14.8□□□□□ -0.04
COMMD6-209ENST00000477377 NACC2Q96BF6 587 aa14.8□□□□□ -0.04
COMMD6-209ENST00000477377 SMAD5Q99717 465 aaKnown RBP14.8□□□□□ -0.04
COMMD6-209ENST00000477377 SARGQ9BW04 601 aa14.8□□□□□ -0.04
COMMD6-209ENST00000477377 PCBD2Q9H0N5 130 aa14.8□□□□□ -0.04
COMMD6-209ENST00000477377 RAB17Q9H0T7 212 aa14.8□□□□□ -0.04
COMMD6-209ENST00000477377 SPNS1Q9H2V7 528 aa14.8□□□□□ -0.04
COMMD6-209ENST00000477377 CAB39LQ9H9S4 337 aa14.8□□□□□ -0.04
COMMD6-209ENST00000477377 POPDC3Q9HBV1 291 aa14.8□□□□□ -0.04
COMMD6-209ENST00000477377 ARL15Q9NXU5 204 aa14.8□□□□□ -0.04
COMMD6-209ENST00000477377 CTAGE15A4D2H0 777 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 FFAR3O14843 346 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 GPR42O15529 346 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 FAM155BO75949 473 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 GUCA1CO95843 209 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 GSTA2P09210 222 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 HIST1H2AGP0C0S8 130 aaPredicted RBP14.79□□□□□ -0.04
COMMD6-209ENST00000477377 ZGLP1P0C6A0 271 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 CDH1P12830 882 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 HIST1H2ADP20671 130 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 GMPRP36959 345 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 MAGEA4P43358 317 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 CAV1Q03135 178 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 KLC1Q07866 573 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 ZKSCAN8Q15776 578 aaPredicted RBP14.79□□□□□ -0.04
COMMD6-209ENST00000477377 CAPN13Q6MZZ7 669 aaPredicted RBP14.79□□□□□ -0.04
COMMD6-209ENST00000477377 PRSS41Q7RTY9 318 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 ADCK2Q7Z695 626 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 CTAGE6Q86UF2 777 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 NKAPQ8N5F7 415 aaKnown RBP14.79□□□□□ -0.04
COMMD6-209ENST00000477377 COL26A1Q96A83 441 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 MVB12AQ96EY5 273 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 CABS1Q96KC9 395 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 HIST1H2AHQ96KK5 128 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 IP6K3Q96PC2 410 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 GPR22Q99680 433 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 RBBP8Q99708 897 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 HIST1H2AJQ99878 128 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 H2AFJQ9BTM1 129 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 ZNF552Q9H707 407 aaPredicted RBP14.79□□□□□ -0.04
COMMD6-209ENST00000477377 NSMCE4AQ9NXX6 385 aa14.79□□□□□ -0.04
COMMD6-209ENST00000477377 UTP6Q9NYH9 597 aaKnown RBP14.79□□□□□ -0.04
COMMD6-209ENST00000477377 A0A0A6YYC8 382 aaPredicted RBP14.78□□□□□ -0.04
COMMD6-209ENST00000477377 NPEPPSL1A6NEC2 478 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 A6NL46 340 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 I3L1I5 382 aaPredicted RBP14.78□□□□□ -0.04
COMMD6-209ENST00000477377 AGPSO00116 658 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 ALOX12BO75342 701 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 URI1O94763 535 aaPredicted RBP14.78□□□□□ -0.04
COMMD6-209ENST00000477377 WISP1O95388 367 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 CCND1P24385 295 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 RPS15AP62244 130 aaKnown RBP14.78□□□□□ -0.04
COMMD6-209ENST00000477377 CDKL1Q00532 357 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 POU4F1Q01851 419 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 Q0VFX4 171 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 DSG2Q14126 1118 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 FAM53BQ14153 422 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 SYT16Q17RD7 645 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 C18orf21Q32NC0 220 aaPredicted RBP14.78□□□□□ -0.04
COMMD6-209ENST00000477377 KBTBD12Q3ZCT8 623 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 NADK2Q4G0N4 442 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 CATSPEREQ5SY80 951 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 ATG9BQ674R7 924 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 TMEM214Q6NUQ4 689 aaKnown RBP14.78□□□□□ -0.04
COMMD6-209ENST00000477377 C17orf64Q86WR6 236 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 KLHDC8AQ8IYD2 350 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 SPATA6LQ8N4H0 392 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 MMGT1Q8N4V1 131 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 AMER2Q8N7J2 671 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 RBMXL3Q8N7X1 1067 aaKnown RBP14.78□□□□□ -0.04
COMMD6-209ENST00000477377 NOA1Q8NC60 698 aaKnown RBP14.78□□□□□ -0.04
COMMD6-209ENST00000477377 RERGQ96A58 199 aaPredicted RBP14.78□□□□□ -0.04
COMMD6-209ENST00000477377 ALKBH8Q96BT7 664 aaKnown RBP14.78□□□□□ -0.04
COMMD6-209ENST00000477377 THAP11Q96EK4 314 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 FER1L6-AS2Q96M78 137 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 CPNE1Q99829 537 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 UNKQ9C0B0 810 aaKnown RBP14.78□□□□□ -0.04
COMMD6-209ENST00000477377 GPAMQ9HCL2 828 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 ZNF282Q9UDV7 671 aaPredicted RBP14.78□□□□□ -0.04
COMMD6-209ENST00000477377 DMGDHQ9UI17 866 aaKnown RBP14.78□□□□□ -0.04
COMMD6-209ENST00000477377 NXT1Q9UKK6 140 aaKnown RBP14.78□□□□□ -0.04
COMMD6-209ENST00000477377 OARD1Q9Y530 152 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 NUP210LQ5VU65 1888 aa14.78□□□□□ -0.04
COMMD6-209ENST00000477377 PHGDHO43175 533 aaKnown RBP14.77□□□□□ -0.05
COMMD6-209ENST00000477377 CD1DP15813 335 aa14.77□□□□□ -0.05
COMMD6-209ENST00000477377 ECHS1P30084 290 aa14.77□□□□□ -0.05
COMMD6-209ENST00000477377 GP5P40197 560 aa14.77□□□□□ -0.05
COMMD6-209ENST00000477377 KCNC1P48547 511 aa14.77□□□□□ -0.05
COMMD6-209ENST00000477377 CD97P48960 835 aa14.77□□□□□ -0.05
COMMD6-209ENST00000477377 CSRP3P50461 194 aa14.77□□□□□ -0.05
COMMD6-209ENST00000477377 PGDP52209 483 aa14.77□□□□□ -0.05
COMMD6-209ENST00000477377 RRADP55042 308 aa14.77□□□□□ -0.05
COMMD6-209ENST00000477377 MAT1AQ00266 395 aaKnown RBP14.77□□□□□ -0.05
COMMD6-209ENST00000477377 MEF2AQ02078 507 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms