RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 RPL36AP83881 106 aaKnown RBP5.33□□□□□ -1.56
VPS50-212ENST00000476413 KIAA1161Q6NSJ0 714 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 TTC27Q6P3X3 843 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 CTR9Q6PD62 1173 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 KIRREL3Q8IZU9 778 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 CCDC63Q8NA47 563 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 TRIM58Q8NG06 486 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 MGARPQ8TDB4 240 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 SNX21Q969T3 373 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 TMEM143Q96AN5 459 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 RBM41Q96IZ5 413 aaKnown RBP5.33□□□□□ -1.56
VPS50-212ENST00000476413 RASL10BQ96S79 203 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 MTMR12Q9C0I1 747 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 UBQLN3Q9H347 655 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 DBNDD1Q9H9R9 158 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 TMEM161AQ9NX61 479 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 KIAA1217Q5T5P2 1943 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 IL16Q14005 1332 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 MTMR11A4FU01 709 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 H3BMM5 538 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 GLRA3O75311 464 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 SP9P0CG40 484 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 CYP2A7P20853 494 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 ALDH4A1P30038 563 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 SSTR1P30872 391 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 SERPINB6P35237 376 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 KIAA1024LP59773 190 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 HERV-K104P61576 105 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 ARHGAP1Q07960 439 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 RBM39Q14498 530 aaKnown RBP5.32□□□□□ -1.56
VPS50-212ENST00000476413 RPS6KA1Q15418 735 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 SGCBQ16585 318 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 HFEQ30201 348 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 C2orf76Q3KRA6 126 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 AARDQ4LEZ3 155 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 SLC35E4Q6ICL7 350 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 CCDC60Q8IWA6 550 aaPredicted RBP5.32□□□□□ -1.56
VPS50-212ENST00000476413 CNTN4Q8IWV2 1026 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 KLHDC8AQ8IYD2 350 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 RCOR2Q8IZ40 523 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 TDHQ8IZJ6 230 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 OR13C3Q8NGS6 347 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 SLC26A7Q8TE54 656 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 CKAP2Q8WWK9 683 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 EPSTI1Q96J88 318 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 ATP6V0BQ99437 205 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 ZNF559Q9BR84 538 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 OSBPL8Q9BZF1 889 aa5.32□□□□□ -1.56
VPS50-212ENST00000476413 TRAV18A0A075B6X5 111 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 SMIM1B2RUZ4 78 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 NPIPA3F8WFD2 350 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 DDX39AO00148 427 aaKnown RBP5.31□□□□□ -1.56
VPS50-212ENST00000476413 ACSL4O60488 711 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 CDK2AP2O75956 126 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 OLFM2O95897 454 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 ATP1B1P05026 303 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 HMOX1P09601 288 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 RPA4Q13156 261 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 OPCMLQ14982 345 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 KIAA1644Q3SXP7 199 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 FUT11Q495W5 492 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 PRAMEF8Q5VWM4 474 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 FUT10Q6P4F1 479 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 ALKBH5Q6P6C2 394 aaKnown RBP5.31□□□□□ -1.56
VPS50-212ENST00000476413 SLC26A9Q7LBE3 791 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 KIAA0895Q8NCT3 520 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 OR2T11Q8NH01 316 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 RNASE8Q8TDE3 154 aaKnown RBP5.31□□□□□ -1.56
VPS50-212ENST00000476413 CCDC43Q96MW1 224 aaKnown RBP5.31□□□□□ -1.56
VPS50-212ENST00000476413 TSSK2Q96PF2 358 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 CDCA3Q99618 268 aaPredicted RBP5.31□□□□□ -1.56
VPS50-212ENST00000476413 ACAT2Q9BWD1 397 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 RNPEPL1Q9HAU8 725 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 SPG21Q9NZD8 308 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 OR6C2Q9NZP2 312 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 GRID1Q9ULK0 1009 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 KNSTRNQ9Y448 316 aa5.31□□□□□ -1.56
VPS50-212ENST00000476413 C13orf42A0A1B0GVH6 325 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 C5orf51A6NDU8 294 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 ANTXRLA6NF34 631 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 ANKDD1BA6NHY2 528 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 LMX1BO60663 402 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 KERAO60938 352 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 ATP9AO75110 1047 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 CLPTM1O96005 669 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 IGLV2-11P01706 119 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 FAM157CP0CG43 387 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 YBEYP58557 167 aaPredicted RBP5.3□□□□□ -1.56
VPS50-212ENST00000476413 STPG1Q5TH74 334 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 PM20D1Q6GTS8 502 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 OR4C11Q6IEV9 310 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 TMEM207Q6UWW9 146 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 CROCCP3Q8IVE0 287 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 OR1L3Q8NH93 324 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 UBLCP1Q8WVY7 318 aaPredicted RBP5.3□□□□□ -1.56
VPS50-212ENST00000476413 LMLNQ96KR4 655 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 C10orf90Q96M02 699 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 ALKBH7Q9BT30 221 aaPredicted RBP5.3□□□□□ -1.56
VPS50-212ENST00000476413 P2RY12Q9H244 342 aa5.3□□□□□ -1.56
VPS50-212ENST00000476413 C5orf66Q9H5L9 145 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms