RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 COPG2Q9UBF2 871 aa9.92□□□□□ -0.82
CALD1-217ENST00000475772 ZNF282Q9UDV7 671 aaPredicted RBP9.92□□□□□ -0.82
CALD1-217ENST00000475772 C3orf18Q9UK00 162 aa9.92□□□□□ -0.82
CALD1-217ENST00000475772 SLC39A10Q9ULF5 831 aa9.92□□□□□ -0.82
CALD1-217ENST00000475772 RUVBL2Q9Y230 463 aaKnown RBP9.92□□□□□ -0.82
CALD1-217ENST00000475772 HIVEP1P15822 2718 aa9.92□□□□□ -0.82
CALD1-217ENST00000475772 IGHV1-45A0A0A0MS14 117 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 IGKV1-8A0A0C4DH67 115 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 H0YGG7 62 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 EIF1AYO14602 144 aaKnown RBP9.91□□□□□ -0.82
CALD1-217ENST00000475772 PRMT5O14744 637 aaPredicted RBP9.91□□□□□ -0.82
CALD1-217ENST00000475772 FOXS1O43638 330 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 ZNF189O75820 626 aaPredicted RBP9.91□□□□□ -0.82
CALD1-217ENST00000475772 FKBP9O95302 570 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 F10P00742 488 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 APOA4P06727 396 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 CARSP49589 748 aaKnown RBP9.91□□□□□ -0.82
CALD1-217ENST00000475772 ARF3P61204 181 aaPredicted RBP9.91□□□□□ -0.82
CALD1-217ENST00000475772 ARG2P78540 354 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 ART3Q13508 389 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 GBX1Q14549 363 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 SETDB1Q15047 1291 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 FASTKD1Q53R41 847 aaKnown RBP9.91□□□□□ -0.82
CALD1-217ENST00000475772 CTSL3PQ5NE16 218 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 PRMT9Q6P2P2 845 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 FAM180AQ6UWF9 173 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 NLRP9Q7RTR0 991 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 KBTBD2Q8IY47 623 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 AMER3Q8N944 861 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 ATG4AQ8WYN0 398 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 TSPY26PQ9H489 355 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 GALPQ9UBC7 116 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 AMFRQ9UKV5 643 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 TTC7AQ9ULT0 858 aaPredicted RBP9.91□□□□□ -0.82
CALD1-217ENST00000475772 MRPS2Q9Y399 296 aaKnown RBP9.91□□□□□ -0.82
CALD1-217ENST00000475772 TCAF1Q9Y4C2 921 aa9.91□□□□□ -0.82
CALD1-217ENST00000475772 LOC102723996A0A087X1L8 192 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 NSG1A0A0A6YYJ2 146 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 TRAV17A0A0B4J275 112 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 GOLGA6L9A6NEM1 432 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 ERI2A8K979 691 aaKnown RBP9.9□□□□□ -0.82
CALD1-217ENST00000475772 MAP2K7O14733 419 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 MATN4O95460 622 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 WDPCPO95876 746 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 RPN2P04844 631 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 EIF2S1P05198 315 aaKnown RBP9.9□□□□□ -0.82
CALD1-217ENST00000475772 SERPINA7P05543 415 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 ITGAMP11215 1152 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 EPHA1P21709 976 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 RPS3P23396 243 aaKnown RBP eCLIP9.9□□□□□ -0.82
CALD1-217ENST00000475772 STIP1P31948 543 aaKnown RBP9.9□□□□□ -0.82
CALD1-217ENST00000475772 SLC26A3P40879 764 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 CETN2P41208 172 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 EMP2P54851 167 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 OCA2Q04671 838 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 EEF1A2Q05639 463 aaKnown RBP9.9□□□□□ -0.82
CALD1-217ENST00000475772 PCOLCEQ15113 449 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 SYT16Q17RD7 645 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 HKDC1Q2TB90 917 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 IRAK1BP1Q5VVH5 260 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 FAAH2Q6GMR7 532 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 PEX13Q92968 403 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 CCDC120Q96HB5 630 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 IMMP1LQ96LU5 166 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 BIRC8Q96P09 236 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 OR2A5Q96R48 311 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 TTC1Q99614 292 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 DPH7Q9BTV6 452 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 TREX1Q9NSU2 369 aa9.9□□□□□ -0.82
CALD1-217ENST00000475772 RUVBL1Q9Y265 456 aaKnown RBP9.9□□□□□ -0.82
CALD1-217ENST00000475772 KLF2Q9Y5W3 355 aaPredicted RBP9.9□□□□□ -0.82
CALD1-217ENST00000475772 DYTNA2CJ06 578 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 IDSB3KWA1 339 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 CD3EAPO15446 510 aaKnown RBP9.89□□□□□ -0.83
CALD1-217ENST00000475772 LIASO43766 372 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 USP1O94782 785 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 BMP10O95393 424 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 FTCDO95954 541 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 IGHA1P01876 353 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 PROCP04070 461 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 ZSCAN5DPP0CG00 497 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 ERGP11308 486 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 ARNTP27540 789 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 NMBRP28336 390 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 FDFT1P37268 417 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 PRAMEP78395 509 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 CRADDP78560 199 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 CDSNQ15517 529 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 KCTD19Q17RG1 926 aaPredicted RBP9.89□□□□□ -0.83
CALD1-217ENST00000475772 MUM1Q2TAK8 710 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.89□□□□□ -0.83
CALD1-217ENST00000475772 ZNF425Q6IV72 752 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 LRRC8BQ6P9F7 803 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 TMEM205Q6UW68 189 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 SHISA2Q6UWI4 295 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 SUSD1Q6UWL2 747 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 GFRALQ6UXV0 394 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 PPP1R21Q6ZMI0 780 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 PEX26Q7Z412 305 aa9.89□□□□□ -0.83
CALD1-217ENST00000475772 MRGPRGQ86SM5 289 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms