RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 DYTNA2CJ06 578 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 FAM221BA6H8Z2 402 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 TMEM221A6NGB7 291 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 ISM1B1AKI9 464 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 B4DGG1 531 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 C9JVG2 144 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 M0R296 226 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 FBP2O00757 339 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 ANKRD28O15084 1053 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 MYO1DO94832 1006 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 BCKDHAP12694 445 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 CAPN3P20807 821 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 HRH2P25021 359 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 HNRNPKP61978 463 aaKnown RBP eCLIP13.2□□□□□ -0.31e-6■■■■□ 24.3
TRAF4-210ENST00000475329 ELF3P78545 371 aaPredicted RBP13.2□□□□□ -0.3
TRAF4-210ENST00000475329 RBBP5Q15291 538 aaKnown RBP13.2□□□□□ -0.3
TRAF4-210ENST00000475329 SPIN4Q56A73 249 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 COQ5Q5HYK3 327 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 LYSMD4Q5XG99 296 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 HACD2Q6Y1H2 254 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 ADCK2Q7Z695 626 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 SLC9B2Q86UD5 537 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 RBM12BQ8IXT5 1001 aaKnown RBP13.2□□□□□ -0.3
TRAF4-210ENST00000475329 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.2□□□□□ -0.36e-8■■■■□ 22
TRAF4-210ENST00000475329 DEFB107AQ8IZN7 70 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 DSELQ8IZU8 1212 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 PGAM4Q8N0Y7 254 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 NAGSQ8N159 534 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 AVL9Q8NBF6 648 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 PCYOX1LQ8NBM8 494 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 ZNF740Q8NDX6 193 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 OR2L3Q8NG85 312 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 PROKR1Q8TCW9 393 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 LMX1AQ8TE12 382 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 GAB3Q8WWW8 586 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 PATE1Q8WXA2 126 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 SLC22A18Q96BI1 424 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 TEX37Q96LM6 180 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 SERPINI1Q99574 410 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 THTPAQ9BU02 230 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 DPY30Q9C005 99 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 RHBGQ9H310 441 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 SLC6A20Q9NP91 592 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 SPHK1Q9NYA1 384 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 PRPF19Q9UMS4 504 aaKnown RBP13.2□□□□□ -0.3
TRAF4-210ENST00000475329 DOLKQ9UPQ8 538 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 DLGAP4Q9Y2H0 992 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 CROCCQ5TZA2 2017 aa13.2□□□□□ -0.3
TRAF4-210ENST00000475329 TRBC2A0A5B9 178 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 ANKDD1BA6NHY2 528 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 CCDC154A6NI56 674 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 H7BY64 318 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 SDC1P18827 310 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 IL12AP29459 219 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 GRK3P35626 688 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 ZFP36L2P47974 494 aaKnown RBP13.19□□□□□ -0.3
TRAF4-210ENST00000475329 DHPSP49366 369 aaPredicted RBP13.19□□□□□ -0.3
TRAF4-210ENST00000475329 CSNK1EP49674 416 aaKnown RBP13.19□□□□□ -0.3
TRAF4-210ENST00000475329 CLNS1AP54105 237 aaKnown RBP13.19□□□□□ -0.3
TRAF4-210ENST00000475329 YBX1P67809 324 aaKnown RBP13.19□□□□□ -0.3
TRAF4-210ENST00000475329 CSNK1G2P78368 415 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 CSTF1Q05048 431 aaKnown RBP13.19□□□□□ -0.3
TRAF4-210ENST00000475329 TBL3Q12788 808 aaKnown RBP13.19□□□□□ -0.3
TRAF4-210ENST00000475329 PTGR1Q14914 329 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 KIR2DS3Q14952 304 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 SF1Q15637 639 aaKnown RBP13.19□□□□□ -0.3
TRAF4-210ENST00000475329 ZNF423Q2M1K9 1284 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 NOXRED1Q6NXP6 359 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 C1orf210Q8IVY1 113 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 SCUBE1Q8IWY4 988 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 ADGRF3Q8IZF5 1079 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 SDR16C5Q8N3Y7 309 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 TBC1D19Q8N5T2 526 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 C1orf52Q8N6N3 182 aaKnown RBP13.19□□□□□ -0.3
TRAF4-210ENST00000475329 GLB1L3Q8NCI6 653 aaPredicted RBP13.19□□□□□ -0.3
TRAF4-210ENST00000475329 ZNF548Q8NEK5 533 aaPredicted RBP13.19□□□□□ -0.3
TRAF4-210ENST00000475329 ROPN1LQ96C74 230 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 SLC45A3Q96JT2 553 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 PRAP1Q96NZ9 151 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 ACTL8Q9H568 366 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 WDR41Q9HAD4 459 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 TMEM184CQ9NVA4 438 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 GON4LQ3T8J9 2241 aa13.19□□□□□ -0.3
TRAF4-210ENST00000475329 IGKV1-8A0A0C4DH67 115 aa13.18□□□□□ -0.3
TRAF4-210ENST00000475329 A0A1B0GTW7 788 aa13.18□□□□□ -0.3
TRAF4-210ENST00000475329 A0A1W2PP18 115 aa13.18□□□□□ -0.3
TRAF4-210ENST00000475329 BTN3A3O00478 584 aa13.18□□□□□ -0.3
TRAF4-210ENST00000475329 CFLARO15519 480 aa13.18□□□□□ -0.3
TRAF4-210ENST00000475329 AQP9O43315 295 aa13.18□□□□□ -0.3
TRAF4-210ENST00000475329 OR1F1O43749 312 aa13.18□□□□□ -0.3
TRAF4-210ENST00000475329 EEDO75530 441 aaKnown RBP13.18□□□□□ -0.3
TRAF4-210ENST00000475329 CIB2O75838 187 aa13.18□□□□□ -0.3
TRAF4-210ENST00000475329 ETHE1O95571 254 aa13.18□□□□□ -0.3
TRAF4-210ENST00000475329 PTX3P26022 381 aaPredicted RBP13.18□□□□□ -0.3
TRAF4-210ENST00000475329 GSTM2P28161 218 aa13.18□□□□□ -0.3
TRAF4-210ENST00000475329 TIA1P31483 386 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRAF4-210ENST00000475329 RAP1GDS1P52306 607 aa13.18□□□□□ -0.3
TRAF4-210ENST00000475329 CLDN8P56748 225 aa13.18□□□□□ -0.3
TRAF4-210ENST00000475329 HHEXQ03014 270 aa13.18□□□□□ -0.3
TRAF4-210ENST00000475329 VPS26BQ4G0F5 336 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms