RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 TEX13AQ9BXU3 409 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-212ENST00000473961 LAT2Q9GZY6 243 aa3.91□□□□□ -1.78
BRCA1-212ENST00000473961 RIMS4Q9H426 269 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-212ENST00000473961 TLE6Q9H808 572 aa3.91□□□□□ -1.78
BRCA1-212ENST00000473961 EVA1AQ9H8M9 152 aa3.91□□□□□ -1.78
BRCA1-212ENST00000473961 RPF1Q9H9Y2 349 aaKnown RBP3.91□□□□□ -1.78
BRCA1-212ENST00000473961 MAGEF1Q9HAY2 307 aa3.91□□□□□ -1.78
BRCA1-212ENST00000473961 CD93Q9NPY3 652 aa3.91□□□□□ -1.78
BRCA1-212ENST00000473961 EXOC1Q9NV70 894 aa3.91□□□□□ -1.78
BRCA1-212ENST00000473961 DNAJC11Q9NVH1 559 aa3.91□□□□□ -1.78
BRCA1-212ENST00000473961 NOCTQ9UK39 431 aaKnown RBP3.91□□□□□ -1.78
BRCA1-212ENST00000473961 TSPAN16Q9UKR8 245 aa3.91□□□□□ -1.78
BRCA1-212ENST00000473961 FAF1Q9UNN5 650 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-212ENST00000473961 MTF2Q9Y483 593 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-212ENST00000473961 LOC101059948A0A1B0GTJ6 334 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 C2orf92A0A1B0GVN3 265 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 C19orf81C9J6K1 198 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 PRSS46E5RG02 174 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 C16orf97H3BN30 126 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 CAPN9O14815 690 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 PRPSAP2O60256 369 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 STAM2O75886 525 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 LETM1O95202 739 aaPredicted RBP3.9□□□□□ -1.79
BRCA1-212ENST00000473961 BAG3O95817 575 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 IGKV2-30P06310 120 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 ABHD2P08910 425 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 GP1BBP13224 206 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 DESP17661 470 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 ALDH4A1P30038 563 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 HTR6P50406 440 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 SLC12A3P55017 1021 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 CASP9P55211 416 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 EVCP57679 992 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 STARD6P59095 220 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 MYL7Q01449 175 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 IL1RL1Q01638 556 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 TAF10Q12962 218 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 ABRQ12979 859 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 PHLDA2Q53GA4 152 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 FGD3Q5JSP0 725 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 SPDYCQ5MJ68 293 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 STXBP5Q5T5C0 1151 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 LCN1P1Q5VSP4 162 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 AGAP6Q5VW22 663 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 NADSYN1Q6IA69 706 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 PRSS55Q6UWB4 352 aaPredicted RBP3.9□□□□□ -1.79
BRCA1-212ENST00000473961 ZNF852Q6ZMS4 543 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 G2E3Q7L622 706 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 MTERF4Q7Z6M4 381 aaKnown RBP3.9□□□□□ -1.79
BRCA1-212ENST00000473961 SLC9B2Q86UD5 537 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 TMEM126BQ8IUX1 230 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 APCDD1Q8J025 514 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 NAGSQ8N159 534 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 TEX9Q8N6V9 391 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 RSPH1Q8WYR4 309 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 TAF4BQ92750 862 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 ULK4Q96C45 1275 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 THOC3Q96J01 351 aaKnown RBP3.9□□□□□ -1.79
BRCA1-212ENST00000473961 BTBD9Q96Q07 612 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 RASL10BQ96S79 203 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 MEIS3Q99687 375 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 ZPBPQ9BS86 351 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 RHNO1Q9BSD3 238 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 TRIM7Q9C029 511 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 TSPYL1Q9H0U9 437 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 CPVLQ9H3G5 476 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 SDR39U1Q9NRG7 319 aaPredicted RBP3.9□□□□□ -1.79
BRCA1-212ENST00000473961 PNPLA3Q9NST1 481 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 CCPG1Q9ULG6 757 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 KCNJ14Q9UNX9 436 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 EXOC6BQ9Y2D4 811 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 HBS1LQ9Y450 684 aaKnown RBP3.9□□□□□ -1.79
BRCA1-212ENST00000473961 CUX2O14529 1486 aa3.9□□□□□ -1.79
BRCA1-212ENST00000473961 ARHGAP42A6NI28 874 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 EPHB6O15197 1021 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 VEGFDO43915 354 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 SSX5O60225 188 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 KRT33AO76009 404 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 ZBTB11O95625 1053 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-212ENST00000473961 ALPPP05187 535 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 YES1P07947 543 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 ALPPL2P10696 532 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 PCP11498 1178 aaKnown RBP3.89□□□□□ -1.79
BRCA1-212ENST00000473961 MSH3P20585 1137 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 CA4P22748 312 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 DGKAP23743 735 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 CLDN17P56750 224 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 RPP38P78345 283 aaKnown RBP3.89□□□□□ -1.79
BRCA1-212ENST00000473961 POU3F1Q03052 451 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-212ENST00000473961 PPP1R8Q12972 351 aaKnown RBP3.89□□□□□ -1.79
BRCA1-212ENST00000473961 PTPN14Q15678 1187 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 HFEQ30201 348 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 ARMCX4Q5H9R4 360 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 SUSD4Q5VX71 490 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 B3GLCTQ6Y288 498 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 MACC1Q6ZN28 852 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 BTN2A1Q7KYR7 527 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 PRUNE1Q86TP1 453 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 ISCA2Q86U28 154 aa3.89□□□□□ -1.79
BRCA1-212ENST00000473961 NFE4Q86UQ8 179 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms