RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 ZNF852Q6ZMS4 543 aa17.32■□□□□ 0.36
VARS2-206ENST00000473916 SPPL2CQ8IUH8 684 aa17.32■□□□□ 0.36
VARS2-206ENST00000473916 HOMEZQ8IX15 550 aa17.32■□□□□ 0.36
VARS2-206ENST00000473916 TOE1Q96GM8 510 aaKnown RBP17.32■□□□□ 0.36
VARS2-206ENST00000473916 WDR92Q96MX6 357 aa17.32■□□□□ 0.36
VARS2-206ENST00000473916 KCTD14Q9BQ13 255 aaPredicted RBP17.32■□□□□ 0.36
VARS2-206ENST00000473916 LMAN1LQ9HAT1 526 aa17.32■□□□□ 0.36
VARS2-206ENST00000473916 A0A1W2PPC1 479 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 TCRBV3S1A0A5B6 114 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 C10orf142B7Z368 130 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 H7BY64 318 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 ARPC2O15144 300 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 GSNP06396 782 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 RPSAP08865 295 aaKnown RBP17.31■□□□□ 0.36
VARS2-206ENST00000473916 EFNA1P20827 205 aaPredicted RBP17.31■□□□□ 0.36
VARS2-206ENST00000473916 CYP4F2P78329 520 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 RBBP5Q15291 538 aaKnown RBP17.31■□□□□ 0.36
VARS2-206ENST00000473916 TAF11Q15544 211 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 HKDC1Q2TB90 917 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 PAGE2BQ5JRK9 111 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 SLC30A9Q6PML9 568 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 C17orf64Q86WR6 236 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 PQLC1Q8N2U9 271 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 TMEM145Q8NBT3 493 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 OR52E1Q8NGJ3 308 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 WDR48Q8TAF3 677 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 SMPDL3AQ92484 453 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 AURKBQ96GD4 344 aaPredicted RBP17.31■□□□□ 0.36
VARS2-206ENST00000473916 MSANTD3Q96H12 275 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 PRAP1Q96NZ9 151 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 HAUS8Q9BT25 410 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 SORBS1Q9BX66 1292 aaKnown RBP17.31■□□□□ 0.36
VARS2-206ENST00000473916 TPSD1Q9BZJ3 242 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 FOXQ1Q9C009 403 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 POLMQ9NP87 494 aaPredicted RBP17.31■□□□□ 0.36
VARS2-206ENST00000473916 SPATA7Q9P0W8 599 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 DUSP12Q9UNI6 340 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 ICKQ9UPZ9 632 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 RUVBL1Q9Y265 456 aaKnown RBP17.31■□□□□ 0.36
VARS2-206ENST00000473916 BTBD3Q9Y2F9 522 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 LRRC42Q9Y546 428 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 TRBV23OR9-2A0A075B6M9 112 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 PRSS51A0A1B0GVH4 220 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 KRBA1A5PL33 1030 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 YY2O15391 372 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 TBX6O95947 436 aaPredicted RBP17.31■□□□□ 0.36
VARS2-206ENST00000473916 HOXC4P09017 264 aaPredicted RBP17.31■□□□□ 0.36
VARS2-206ENST00000473916 ACPPP15309 386 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 CLNS1AP54105 237 aaKnown RBP17.31■□□□□ 0.36
VARS2-206ENST00000473916 TRIP10Q15642 601 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 TMIGD1Q6UXZ0 262 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 Q6ZSR6 202 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 PLD3Q8IV08 490 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 SLC22A18ASQ8N1D0 253 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 C10orf111Q8N326 155 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 ANKRD53Q8N9V6 530 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 OR13H1Q8NG92 308 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 TESCQ96BS2 214 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 REPS1Q96D71 796 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 ANKRD27Q96NW4 1050 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 PKP2Q99959 881 aa17.31■□□□□ 0.36
VARS2-206ENST00000473916 PAIP1Q9H074 479 aaKnown RBP17.31■□□□□ 0.36
VARS2-206ENST00000473916 IGKV1-8A0A0C4DH67 115 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 RASGRP1O95267 797 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 NPPAP01160 153 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 ANXA4P09525 319 aaPredicted RBP17.3■□□□□ 0.36
VARS2-206ENST00000473916 PKLRP30613 574 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 PXNP49023 591 aaPredicted RBP17.3■□□□□ 0.36
VARS2-206ENST00000473916 DGKEP52429 567 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 RHDQ02161 417 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 SFSWAPQ12872 951 aaKnown RBP17.3■□□□□ 0.36
VARS2-206ENST00000473916 FZD5Q13467 585 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 KRT33BQ14525 404 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 HIST2H2ACQ16777 129 aaPredicted RBP17.3■□□□□ 0.36
VARS2-206ENST00000473916 ALG11Q2TAA5 492 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 HIST2H2AA3Q6FI13 130 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 COMMD6Q7Z4G1 85 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 DNAJC9Q8WXX5 260 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 MIEF2Q96C03 454 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 BIRC7Q96CA5 298 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 GPR174Q9BXC1 333 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 REXO4Q9GZR2 422 aaKnown RBP17.3■□□□□ 0.36
VARS2-206ENST00000473916 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.3■□□□□ 0.36
VARS2-206ENST00000473916 BCAP29Q9UHQ4 241 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 RIMS3Q9UJD0 308 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 ERVK-11Q9UQG0 969 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 PCDHB14Q9Y5E9 798 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 MDC1Q14676 2089 aaKnown RBP17.3■□□□□ 0.36
VARS2-206ENST00000473916 ARHGAP10A1A4S6 786 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 FOXE1O00358 373 aaPredicted RBP17.3■□□□□ 0.36
VARS2-206ENST00000473916 PCDH7O60245 1069 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 KLHL18O94889 574 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 PTPN6P29350 595 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 TIA1P31483 386 aaKnown RBP eCLIP17.3■□□□□ 0.36
VARS2-206ENST00000473916 AKT2P31751 481 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 RAB28P51157 221 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 EEFSECP57772 596 aaKnown RBP17.3■□□□□ 0.36
VARS2-206ENST00000473916 UBXN2BQ14CS0 331 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 IZUMO2Q6UXV1 221 aa17.3■□□□□ 0.36
VARS2-206ENST00000473916 SYT13Q7L8C5 426 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms