RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 CBSP35520 551 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 TGFBR2P37173 567 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 GSSP48637 474 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 CASP9P55211 416 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 KEAP1Q14145 624 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 MAD2L1BPQ15013 274 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-214ENST00000473778 RFX4Q33E94 735 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 CCSMST1Q4G0I0 132 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 PRSS36Q5K4E3 855 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 SYT6Q5T7P8 510 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-214ENST00000473778 NIPAL1Q6NVV3 410 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 FAM124AQ86V42 546 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 CMTM8Q8IZV2 173 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 SLC7A5P1Q8MH63 180 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 LILRA3Q8N6C8 439 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-214ENST00000473778 DNAJB8Q8NHS0 232 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 CDC26Q8NHZ8 85 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 DYNC2LI1Q8TCX1 351 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 RORBQ92753 470 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 ASIC4Q96FT7 647 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 FCRL1Q96LA6 429 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 SAMD11Q96NU1 681 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 C19orf43Q9BQ61 176 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 CHST8Q9H2A9 424 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 TM9SF3Q9HD45 589 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 ACOT13Q9NPJ3 140 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 CCDC88CQ9P219 2028 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 SAMHD1Q9Y3Z3 626 aaKnown RBP10.59□□□□□ -0.71
C9orf3-214ENST00000473778 ORC6Q9Y5N6 252 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 GMPPBQ9Y5P6 360 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 ALPK3Q96L96 1907 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 KRBA1A5PL33 1030 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 MAGEB17A8MXT2 336 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 E7EQ34 232 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 E9PQ18 207 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 NPIPB8E9PQR5 432 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 NUAK1O60285 661 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 ARHGEF15O94989 841 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 CPSF4O95639 269 aaKnown RBP10.58□□□□□ -0.72
C9orf3-214ENST00000473778 LATS1O95835 1130 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 IGSF6O95976 241 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 FABP3P05413 133 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 PSMB9P28065 219 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 CSNK1DP48730 415 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 GAB1Q13480 694 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 DDX39BQ13838 428 aaKnown RBP10.58□□□□□ -0.72
C9orf3-214ENST00000473778 ACOX1Q15067 660 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 DUOXA1Q1HG43 343 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.58□□□□□ -0.72
C9orf3-214ENST00000473778 ASTLQ6HA08 431 aaPredicted RBP10.58□□□□□ -0.72
C9orf3-214ENST00000473778 DPY19L3Q6ZPD9 716 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 CBLL1Q75N03 491 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 DEFB128Q7Z7B8 93 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 SYT12Q8IV01 421 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 ENTHD1Q8IYW4 607 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 CHST14Q8NCH0 376 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 ZNF540Q8NDQ6 660 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 WDR20Q8TBZ3 569 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 NELL1Q92832 810 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 GLMNQ92990 594 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 SH3KBP1Q96B97 665 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 TAMM41Q96BW9 452 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 VMP1Q96GC9 406 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 LMLNQ96KR4 655 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 C7orf34Q96L11 122 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 MROQ9BYG7 248 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 THUMPD1Q9NXG2 353 aaKnown RBP10.58□□□□□ -0.72
C9orf3-214ENST00000473778 SRRDQ9UH36 339 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 AP3M1Q9Y2T2 418 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 INSL5Q9Y5Q6 135 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 CNOT3O75175 753 aaKnown RBP10.58□□□□□ -0.72
C9orf3-214ENST00000473778 NADKO95544 446 aaPredicted RBP10.58□□□□□ -0.72
C9orf3-214ENST00000473778 ACPPP15309 386 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 TNFRSF1BP20333 461 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 FPR1P21462 350 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 DNAJA1P31689 397 aaKnown RBP10.58□□□□□ -0.72
C9orf3-214ENST00000473778 SPINT3P49223 89 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 RAE1P78406 368 aaKnown RBP10.58□□□□□ -0.72
C9orf3-214ENST00000473778 KCNJ10P78508 379 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 SP3Q02447 781 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 CAMK2BQ13554 666 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 DNASE1L3Q13609 305 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 PAGE2BQ5JRK9 111 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 P2RY8Q86VZ1 359 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 IQCF2Q8IXL9 164 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 HS6ST3Q8IZP7 471 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 PGBD3Q8N328 593 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 DNASE1L2Q92874 299 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 TPD52L3Q96J77 140 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 OR4K3Q96R72 315 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 MCCC1Q96RQ3 725 aaPredicted RBP10.58□□□□□ -0.72
C9orf3-214ENST00000473778 TSEN34Q9BSV6 310 aaKnown RBP10.58□□□□□ -0.72
C9orf3-214ENST00000473778 NDEL1Q9GZM8 345 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 SLIRPQ9GZT3 109 aaKnown RBP10.58□□□□□ -0.72
C9orf3-214ENST00000473778 SUV39H2Q9H5I1 410 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 ZDHHC6Q9H6R6 413 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 CFAP97Q9P2B7 532 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 B4GALT6Q9UBX8 382 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 SLCO3A1Q9UIG8 710 aa10.58□□□□□ -0.72
C9orf3-214ENST00000473778 DAPK2Q9UIK4 370 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms