RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 GOLGA8TH3BQL2 631 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 CD3EAPO15446 510 aaKnown RBP11.9□□□□□ -0.5
TRAF4-209ENST00000473421 NEURL1O76050 574 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 SUN1O94901 812 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 CAPN3P20807 821 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 NMBRP28336 390 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 CMPK1P30085 196 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 CASP6P55212 293 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 CDH17Q12864 832 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 TSTA3Q13630 321 aaPredicted RBP11.9□□□□□ -0.5
TRAF4-209ENST00000473421 PLAG1Q6DJT9 500 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 CES3Q6UWW8 571 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 VN1R4Q7Z5H5 301 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 ANKRD37Q7Z713 158 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 RPRMLQ8N4K4 120 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 SDCCAG3Q96C92 435 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 MVB12AQ96EY5 273 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 PKP4Q99569 1192 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 SLC30A3Q99726 388 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 DRC3Q9H069 523 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 CATSPERZQ9NTU4 200 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 HCN3Q9P1Z3 774 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 RIMKLBQ9ULI2 386 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 ACANP16112 2415 aa11.9□□□□□ -0.5
TRAF4-209ENST00000473421 INTS1Q8N201 2190 aaKnown RBP11.89□□□□□ -0.51
TRAF4-209ENST00000473421 TTI1O43156 1089 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 PSMD3O43242 534 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 TPM3P06753 285 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 ANXA5P08758 320 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 ZSCAN5DPP0CG00 497 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 ICAM2P13598 275 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 IGFBP2P18065 325 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 PTGER1P34995 402 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 ANP32AP39687 249 aaKnown RBP11.89□□□□□ -0.51
TRAF4-209ENST00000473421 EIF3BP55884 814 aaKnown RBP11.89□□□□□ -0.51
TRAF4-209ENST00000473421 PRAMEP78395 509 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 PRDX1Q06830 199 aaKnown RBP11.89□□□□□ -0.51
TRAF4-209ENST00000473421 KCNJ11Q14654 390 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 TMED2Q15363 201 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 P3H1Q32P28 736 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 MINDY4Q4G0A6 757 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 KRTCAP3Q53RY4 240 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 ICE2Q659A1 982 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 TTC23LQ6PF05 361 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 PPP1R21Q6ZMI0 780 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 OTOAQ7RTW8 1153 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 LINC00523Q86TU6 105 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 PDSS2Q86YH6 399 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 CNGA4Q8IV77 575 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 KIF2BQ8N4N8 673 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 OR9A1PQ8NGU1 263 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 LRRC45Q96CN5 670 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 RBCK1Q9BYM8 510 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 UCK2Q9BZX2 261 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 KCNK13Q9HB14 408 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 TREX1Q9NSU2 369 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 SPATA7Q9P0W8 599 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 SH2B3Q9UQQ2 575 aa11.89□□□□□ -0.51
TRAF4-209ENST00000473421 AKAP6Q13023 2319 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 NKX2-6A6NCS4 301 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 GABRR3A8MPY1 467 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 H7BY64 318 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 SGK494L7N484 410 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 MYO1CO00159 1063 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 CBFA2T2O43439 604 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 SLC16A8O95907 504 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 SP1P08047 785 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 TPM1P09493 284 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 IL1RNP18510 177 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 EEF1DP29692 281 aaKnown RBP11.88□□□□□ -0.51
TRAF4-209ENST00000473421 FMO4P31512 558 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 RPA3P35244 121 aaPredicted RBP11.88□□□□□ -0.51
TRAF4-209ENST00000473421 RFC3P40938 356 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 ART1P52961 327 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 OASLQ15646 514 aaKnown RBP11.88□□□□□ -0.51
TRAF4-209ENST00000473421 LONRF1Q17RB8 773 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 MFSD4BQ5TF39 518 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 LRRC56Q8IYG6 542 aaPredicted RBP11.88□□□□□ -0.51
TRAF4-209ENST00000473421 CPSF7Q8N684 471 aaKnown RBP11.88□□□□□ -0.51
TRAF4-209ENST00000473421 RNF214Q8ND24 703 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 OR51Q1Q8NH59 317 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 ZNF480Q8WV37 535 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 CHTF18Q8WVB6 975 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 SMPDL3AQ92484 453 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 TSLPQ969D9 159 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 ZNF354BQ96LW1 612 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 PRAP1Q96NZ9 151 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 TTC1Q99614 292 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 UTP23Q9BRU9 249 aaKnown RBP11.88□□□□□ -0.51
TRAF4-209ENST00000473421 TSSK1BQ9BXA7 367 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 GPAMQ9HCL2 828 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 PCDHGB6Q9Y5F9 930 aa11.88□□□□□ -0.51
TRAF4-209ENST00000473421 E7ENX8 843 aa11.87□□□□□ -0.51
TRAF4-209ENST00000473421 E9PLN8 166 aa11.87□□□□□ -0.51
TRAF4-209ENST00000473421 PSIP1O75475 530 aaKnown RBP11.87□□□□□ -0.51
TRAF4-209ENST00000473421 NDUFS3O75489 264 aa11.87□□□□□ -0.51
TRAF4-209ENST00000473421 CDC123O75794 336 aaPredicted RBP11.87□□□□□ -0.51
TRAF4-209ENST00000473421 NADKO95544 446 aaPredicted RBP11.87□□□□□ -0.51
TRAF4-209ENST00000473421 FTCDO95954 541 aa11.87□□□□□ -0.51
TRAF4-209ENST00000473421 B3GALT4O96024 378 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms