RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 GLRBP48167 497 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 SERPINB8P50452 374 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 FOXL2P58012 376 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 ATP6V0D1P61421 351 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 NFKB2Q00653 900 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 NFATC3Q12968 1075 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 CATSPEREQ5SY80 951 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 FAM69BQ5VUD6 431 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 LCTLQ6UWM7 567 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 DSELQ8IZU8 1212 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 CYP4X1Q8N118 509 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 ZNF655Q8N720 491 aaPredicted RBP12.54□□□□□ -0.4
TPM3-216ENST00000473036 CT55Q8WUE5 264 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 HIST1H2AHQ96KK5 128 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 OR2A5Q96R48 311 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 HIST1H2AJQ99878 128 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 H2AFJQ9BTM1 129 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 ACTR5Q9H9F9 607 aaPredicted RBP12.54□□□□□ -0.4
TPM3-216ENST00000473036 LHX9Q9NQ69 397 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 SLC22A11Q9NSA0 550 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 PSMC3IPQ9P2W1 217 aaPredicted RBP12.54□□□□□ -0.4
TPM3-216ENST00000473036 DHCR7Q9UBM7 475 aaKnown RBP12.54□□□□□ -0.4
TPM3-216ENST00000473036 SERTAD3Q9UJW9 196 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 CROTQ9UKG9 612 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 PLAAQ9Y263 795 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 SLC22A14Q9Y267 594 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 ACOT9Q9Y305 439 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 A0A087X1B8 175 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 FITM1A5D6W6 292 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 H0YGG7 62 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 UBXN8O00124 270 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 MEN1O00255 615 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 SUV39H1O43463 412 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 CPNE3O75131 537 aaKnown RBP12.53□□□□□ -0.4
TPM3-216ENST00000473036 KLHL2O95198 593 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 SBK3P0C264 359 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 EPORP19235 508 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 TYK2P29597 1187 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 GGT5P36269 586 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 SLC26A3P40879 764 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 AGTR2P50052 363 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 VSX2P58304 361 aaPredicted RBP12.53□□□□□ -0.4
TPM3-216ENST00000473036 ARF3P61204 181 aaPredicted RBP12.53□□□□□ -0.4
TPM3-216ENST00000473036 CYP4F2P78329 520 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 ABATP80404 500 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 MEF2AQ02078 507 aaPredicted RBP12.53□□□□□ -0.4
TPM3-216ENST00000473036 ABHD18Q0P651 414 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 HKDC1Q2TB90 917 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 WASHC2DQ5SRD0 308 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 MANEAQ5SRI9 462 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 THEMIS2Q5TEJ8 643 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 C1orf189Q5VU69 101 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 CAPN13Q6MZZ7 669 aaPredicted RBP12.53□□□□□ -0.4
TPM3-216ENST00000473036 SH2D5Q6ZV89 423 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 VN1R4Q7Z5H5 301 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 THOC6Q86W42 341 aaKnown RBP12.53□□□□□ -0.4
TPM3-216ENST00000473036 GPSM1Q86YR5 675 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 TMEM151AQ8N4L1 468 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 ESX1Q8N693 406 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 IL22RA1Q8N6P7 574 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 EXD3Q8N9H8 876 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 PDPRQ8NCN5 879 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 ZNF740Q8NDX6 193 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 ABHD11Q8NFV4 315 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 OR4K1Q8NGD4 311 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 OR2W6PQ8NHA6 318 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 NEIL2Q969S2 332 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 C10orf90Q96M02 699 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 TSNARE1Q96NA8 513 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 LRFN5Q96NI6 719 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 GBP5Q96PP8 586 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 MACROD1Q9BQ69 325 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 SELENOSQ9BQE4 189 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 ARHGAP9Q9BRR9 750 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 TRIM54Q9BYV2 358 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 VPS11Q9H270 941 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 CHST8Q9H2A9 424 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 FANCEQ9HB96 536 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 WDR70Q9NW82 654 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 SENP1Q9P0U3 644 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 PTBP2Q9UKA9 531 aaKnown RBP12.53□□□□□ -0.4
TPM3-216ENST00000473036 LRRK2Q5S007 2527 aa12.53□□□□□ -0.4
TPM3-216ENST00000473036 SCN3AQ9NY46 2000 aa12.52□□□□□ -0.4
TPM3-216ENST00000473036 FEZF1A0PJY2 475 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 LRRC14BA6NHZ5 514 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 ZSCAN9O15535 394 aaPredicted RBP12.52□□□□□ -0.41
TPM3-216ENST00000473036 KERAO60938 352 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 CNOT3O75175 753 aaKnown RBP12.52□□□□□ -0.41
TPM3-216ENST00000473036 ANXA5P08758 320 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 SNRPAP09012 282 aaKnown RBP12.52□□□□□ -0.41
TPM3-216ENST00000473036 BCL6P41182 706 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 HSPA7P48741 367 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 RPS18P62269 152 aaKnown RBP12.52□□□□□ -0.41
TPM3-216ENST00000473036 PRTGQ2VWP7 1150 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 TECRLQ5HYJ1 363 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 ZC3H12BQ5HYM0 836 aaKnown RBP12.52□□□□□ -0.41
TPM3-216ENST00000473036 RHBDD2Q6NTF9 364 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 FAM198BQ6UWH4 519 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 TIFABQ6ZNK6 161 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 FRA10AC1Q70Z53 315 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms