RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 DCTP40126 519 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 SKIV2L2P42285 1042 aaKnown RBP18.75■□□□□ 0.59
COL9A3-210ENST00000472880 AVPR1BP47901 424 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 AP2B1P63010 937 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 FAM53BQ14153 422 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 SYT16Q17RD7 645 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 RPUSD3Q6P087 351 aaKnown RBP18.75■□□□□ 0.59
COL9A3-210ENST00000472880 CCDC137Q6PK04 289 aaKnown RBP18.75■□□□□ 0.59
COL9A3-210ENST00000472880 RIPOR1Q6ZS17 1223 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 PIWIL4Q7Z3Z4 852 aaKnown RBP18.75■□□□□ 0.59
COL9A3-210ENST00000472880 ZC3H7AQ8IWR0 971 aaKnown RBP18.75■□□□□ 0.59
COL9A3-210ENST00000472880 CPNE9Q8IYJ1 553 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 RASGEF1CQ8N431 466 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 ARHGEF39Q8N4T4 335 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 NAP1L3Q99457 506 aaPredicted RBP18.75■□□□□ 0.59
COL9A3-210ENST00000472880 FAM167BQ9BTA0 163 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 CCDC177Q9NQR7 707 aaPredicted RBP18.75■□□□□ 0.59
COL9A3-210ENST00000472880 OLAHQ9NV23 265 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 TEX15Q9BXT5 2789 aa18.75■□□□□ 0.59
COL9A3-210ENST00000472880 MDC1Q14676 2089 aaKnown RBP18.74■□□□□ 0.59
COL9A3-210ENST00000472880 HEATR5BQ9P2D3 2071 aa18.74■□□□□ 0.59
COL9A3-210ENST00000472880 H7BY64 318 aa18.74■□□□□ 0.59
COL9A3-210ENST00000472880 MAGEA3P43357 314 aa18.74■□□□□ 0.59
COL9A3-210ENST00000472880 MPP1Q00013 466 aa18.74■□□□□ 0.59
COL9A3-210ENST00000472880 INAQ16352 499 aa18.74■□□□□ 0.59
COL9A3-210ENST00000472880 SPNS2Q8IVW8 549 aa18.74■□□□□ 0.59
COL9A3-210ENST00000472880 LRRC56Q8IYG6 542 aaPredicted RBP18.74■□□□□ 0.59
COL9A3-210ENST00000472880 PSMF1Q92530 271 aa18.74■□□□□ 0.59
COL9A3-210ENST00000472880 MS4A14Q96JA4 679 aa18.74■□□□□ 0.59
COL9A3-210ENST00000472880 PBKQ96KB5 322 aa18.74■□□□□ 0.59
COL9A3-210ENST00000472880 PRAP1Q96NZ9 151 aa18.74■□□□□ 0.59
COL9A3-210ENST00000472880 SLX1AQ9BQ83 275 aa18.74■□□□□ 0.59
COL9A3-210ENST00000472880 AARSD1Q9BTE6 412 aaKnown RBP18.74■□□□□ 0.59
COL9A3-210ENST00000472880 TRMT6Q9UJA5 497 aaKnown RBP18.74■□□□□ 0.59
COL9A3-210ENST00000472880 FBXO5Q9UKT4 447 aa18.74■□□□□ 0.59
COL9A3-210ENST00000472880 MKL2Q9ULH7 1088 aa18.74■□□□□ 0.59
COL9A3-210ENST00000472880 MRPS2Q9Y399 296 aaKnown RBP18.74■□□□□ 0.59
COL9A3-210ENST00000472880 LOC102723996A0A087X1L8 192 aa18.73■□□□□ 0.59
COL9A3-210ENST00000472880 TRAV17A0A0B4J275 112 aa18.73■□□□□ 0.59
COL9A3-210ENST00000472880 EIF3FO00303 357 aaPredicted RBP18.73■□□□□ 0.59
COL9A3-210ENST00000472880 LRRTM2O43300 516 aa18.73■□□□□ 0.59
COL9A3-210ENST00000472880 STATHP02808 62 aa18.73■□□□□ 0.59
COL9A3-210ENST00000472880 HRH2P25021 359 aa18.73■□□□□ 0.59
COL9A3-210ENST00000472880 TNFSF10P50591 281 aa18.73■□□□□ 0.59
COL9A3-210ENST00000472880 RPS15AP62244 130 aaKnown RBP18.73■□□□□ 0.59
COL9A3-210ENST00000472880 TBPL1P62380 186 aa18.73■□□□□ 0.59
COL9A3-210ENST00000472880 MAT1AQ00266 395 aaKnown RBP18.73■□□□□ 0.59
COL9A3-210ENST00000472880 PCOLCEQ15113 449 aa18.73■□□□□ 0.59
COL9A3-210ENST00000472880 CYP1B1Q16678 543 aa18.73■□□□□ 0.59
COL9A3-210ENST00000472880 LRRC8EQ6NSJ5 796 aa18.73■□□□□ 0.59
COL9A3-210ENST00000472880 CYHR1Q6ZMK1 362 aa18.73■□□□□ 0.59
COL9A3-210ENST00000472880 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.73■□□□□ 0.59
COL9A3-210ENST00000472880 GRK7Q8WTQ7 553 aa18.73■□□□□ 0.59
COL9A3-210ENST00000472880 METTL21AQ8WXB1 218 aa18.73■□□□□ 0.59
COL9A3-210ENST00000472880 ZNF700Q9H0M5 742 aa18.73■□□□□ 0.59
COL9A3-210ENST00000472880 TMEM184CQ9NVA4 438 aa18.73■□□□□ 0.59
COL9A3-210ENST00000472880 PLA2G3Q9NZ20 509 aa18.73■□□□□ 0.59
COL9A3-210ENST00000472880 NEU2Q9Y3R4 380 aa18.73■□□□□ 0.59
COL9A3-210ENST00000472880 JRKLQ9Y4A0 524 aa18.73■□□□□ 0.59
COL9A3-210ENST00000472880 H0YIG0 161 aa18.72■□□□□ 0.59
COL9A3-210ENST00000472880 PGRMC1O00264 195 aaKnown RBP18.72■□□□□ 0.59
COL9A3-210ENST00000472880 HAUS5O94927 633 aa18.72■□□□□ 0.59
COL9A3-210ENST00000472880 CELA2AP08217 269 aa18.72■□□□□ 0.59
COL9A3-210ENST00000472880 C8orf89P0DMQ9 161 aa18.72■□□□□ 0.59
COL9A3-210ENST00000472880 ICAM2P13598 275 aa18.72■□□□□ 0.59
COL9A3-210ENST00000472880 RGS4P49798 205 aa18.72■□□□□ 0.59
COL9A3-210ENST00000472880 PTK6Q13882 451 aa18.72■□□□□ 0.59
COL9A3-210ENST00000472880 HSP90AA5PQ58FG0 334 aa18.72■□□□□ 0.59
COL9A3-210ENST00000472880 MFSD4BQ5TF39 518 aa18.72■□□□□ 0.59
COL9A3-210ENST00000472880 UGT3A1Q6NUS8 523 aa18.72■□□□□ 0.59
COL9A3-210ENST00000472880 TMEM205Q6UW68 189 aa18.72■□□□□ 0.59
COL9A3-210ENST00000472880 PALM2Q8IXS6 379 aa18.72■□□□□ 0.59
COL9A3-210ENST00000472880 AGGF1Q8N302 714 aaeCLIP18.72■□□□□ 0.59
COL9A3-210ENST00000472880 NAT8LQ8N9F0 302 aa18.72■□□□□ 0.59
COL9A3-210ENST00000472880 OR9A4Q8NGU2 314 aa18.72■□□□□ 0.59
COL9A3-210ENST00000472880 MCOLN3Q8TDD5 553 aa18.72■□□□□ 0.59
COL9A3-210ENST00000472880 HAS2Q92819 552 aa18.72■□□□□ 0.59
COL9A3-210ENST00000472880 TUBB6Q9BUF5 446 aa18.72■□□□□ 0.59
COL9A3-210ENST00000472880 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.72■□□□□ 0.59
COL9A3-210ENST00000472880 PCBD2Q9H0N5 130 aa18.72■□□□□ 0.59
COL9A3-210ENST00000472880 IARS2Q9NSE4 1012 aaKnown RBP18.72■□□□□ 0.59
COL9A3-210ENST00000472880 GOLGA6L10A0A0M3HER8 536 aa18.71■□□□□ 0.59
COL9A3-210ENST00000472880 JRKO75564 520 aa18.71■□□□□ 0.59
COL9A3-210ENST00000472880 NSA2O95478 260 aaKnown RBP18.71■□□□□ 0.59
COL9A3-210ENST00000472880 ITGAMP11215 1152 aa18.71■□□□□ 0.59
COL9A3-210ENST00000472880 MINDY4Q4G0A6 757 aa18.71■□□□□ 0.59
COL9A3-210ENST00000472880 HIBCHQ6NVY1 386 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-210ENST00000472880 PPIL6Q8IXY8 311 aa18.71■□□□□ 0.59
COL9A3-210ENST00000472880 GABPB2Q8TAK5 448 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-210ENST00000472880 SIGLEC10Q96LC7 697 aa18.71■□□□□ 0.59
COL9A3-210ENST00000472880 CCDC138Q96M89 665 aa18.71■□□□□ 0.59
COL9A3-210ENST00000472880 NDNQ99608 321 aa18.71■□□□□ 0.59
COL9A3-210ENST00000472880 C19orf25Q9UFG5 118 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-210ENST00000472880 CPAMD8Q8IZJ3 1885 aa18.71■□□□□ 0.59
COL9A3-210ENST00000472880 F10P00742 488 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 C8GP07360 202 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 CYC1P08574 325 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 PGAM1P18669 254 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 FNTAP49354 379 aa18.7■□□□□ 0.58
COL9A3-210ENST00000472880 SP140Q13342 867 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms