RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 MARCKSL1P49006 195 aa17.91■□□□□ 0.46
SORT1-203ENST00000471996 MINDY4Q4G0A6 757 aa17.91■□□□□ 0.46
SORT1-203ENST00000471996 ANKRD37Q7Z713 158 aa17.91■□□□□ 0.46
SORT1-203ENST00000471996 SLC5A8Q8N695 610 aa17.91■□□□□ 0.46
SORT1-203ENST00000471996 OR2A5Q96R48 311 aa17.91■□□□□ 0.46
SORT1-203ENST00000471996 ACAT2Q9BWD1 397 aa17.91■□□□□ 0.46
SORT1-203ENST00000471996 PIH1D1Q9NWS0 290 aaKnown RBP17.91■□□□□ 0.46
SORT1-203ENST00000471996 NFS1Q9Y697 457 aa17.91■□□□□ 0.46
SORT1-203ENST00000471996 HCFC1P51610 2035 aa17.9■□□□□ 0.46
SORT1-203ENST00000471996 TXNDC9O14530 226 aa17.9■□□□□ 0.46
SORT1-203ENST00000471996 CTAG2O75638 210 aa17.9■□□□□ 0.46
SORT1-203ENST00000471996 SLC25A12O75746 678 aa17.9■□□□□ 0.46
SORT1-203ENST00000471996 AVPR1BP47901 424 aa17.9■□□□□ 0.46
SORT1-203ENST00000471996 AGTR2P50052 363 aa17.9■□□□□ 0.46
SORT1-203ENST00000471996 EIF3EP60228 445 aaKnown RBP17.9■□□□□ 0.46
SORT1-203ENST00000471996 TMED2Q15363 201 aa17.9■□□□□ 0.46
SORT1-203ENST00000471996 MFSD4BQ5TF39 518 aa17.9■□□□□ 0.46
SORT1-203ENST00000471996 DARS2Q6PI48 645 aaKnown RBP17.9■□□□□ 0.46
SORT1-203ENST00000471996 PAQR7Q86WK9 346 aa17.9■□□□□ 0.46
SORT1-203ENST00000471996 CCDC71Q8IV32 467 aaPredicted RBP17.9■□□□□ 0.46
SORT1-203ENST00000471996 CLYBLQ8N0X4 340 aa17.9■□□□□ 0.46
SORT1-203ENST00000471996 LGI4Q8N135 537 aa17.9■□□□□ 0.46
SORT1-203ENST00000471996 KRT222Q8N1A0 295 aa17.9■□□□□ 0.46
SORT1-203ENST00000471996 OR13J1Q8NGT2 312 aa17.9■□□□□ 0.46
SORT1-203ENST00000471996 RERGQ96A58 199 aaPredicted RBP17.9■□□□□ 0.46
SORT1-203ENST00000471996 LIME1Q9H400 295 aa17.9■□□□□ 0.46
SORT1-203ENST00000471996 LRRC40Q9H9A6 602 aa17.9■□□□□ 0.46
SORT1-203ENST00000471996 MRPS30Q9NP92 439 aaKnown RBP17.9■□□□□ 0.46
SORT1-203ENST00000471996 ZNF358Q9NW07 568 aa17.9■□□□□ 0.46
SORT1-203ENST00000471996 SPATA7Q9P0W8 599 aa17.9■□□□□ 0.46
SORT1-203ENST00000471996 INTS1Q8N201 2190 aaKnown RBP17.89■□□□□ 0.45
SORT1-203ENST00000471996 IGKV1-8A0A0C4DH67 115 aa17.89■□□□□ 0.45
SORT1-203ENST00000471996 H0YIG0 161 aa17.89■□□□□ 0.45
SORT1-203ENST00000471996 KLK8O60259 260 aa17.89■□□□□ 0.45
SORT1-203ENST00000471996 GOT2P00505 430 aaKnown RBP17.89■□□□□ 0.45
SORT1-203ENST00000471996 CCNFP41002 786 aa17.89■□□□□ 0.45
SORT1-203ENST00000471996 ADAM8P78325 824 aa17.89■□□□□ 0.45
SORT1-203ENST00000471996 CCDC38Q502W7 563 aa17.89■□□□□ 0.45
SORT1-203ENST00000471996 ZNF468Q5VIY5 522 aaPredicted RBP17.89■□□□□ 0.45
SORT1-203ENST00000471996 AFTPHQ6ULP2 937 aa17.89■□□□□ 0.45
SORT1-203ENST00000471996 BIVMQ86UB2 503 aa17.89■□□□□ 0.45
SORT1-203ENST00000471996 SHISA5Q8N114 240 aa17.89■□□□□ 0.45
SORT1-203ENST00000471996 POGLUT1Q8NBL1 392 aa17.89■□□□□ 0.45
SORT1-203ENST00000471996 GSDMBQ8TAX9 411 aa17.89■□□□□ 0.45
SORT1-203ENST00000471996 ALPK1Q96QP1 1244 aa17.89■□□□□ 0.45
SORT1-203ENST00000471996 TP63Q9H3D4 680 aaPredicted RBP17.89■□□□□ 0.45
SORT1-203ENST00000471996 GOLPH3Q9H4A6 298 aa17.89■□□□□ 0.45
SORT1-203ENST00000471996 SPTLC3Q9NUV7 552 aa17.89■□□□□ 0.45
SORT1-203ENST00000471996 RUVBL2Q9Y230 463 aaKnown RBP17.89■□□□□ 0.45
SORT1-203ENST00000471996 MACROD2A1Z1Q3 448 aa17.88■□□□□ 0.45
SORT1-203ENST00000471996 USP27XA6NNY8 438 aa17.88■□□□□ 0.45
SORT1-203ENST00000471996 P2RX6O15547 441 aa17.88■□□□□ 0.45
SORT1-203ENST00000471996 PKMP14618 531 aaKnown RBP17.88■□□□□ 0.45
SORT1-203ENST00000471996 DNASE1P24855 282 aa17.88■□□□□ 0.45
SORT1-203ENST00000471996 CTNNA2P26232 953 aa17.88■□□□□ 0.45
SORT1-203ENST00000471996 PPARGP37231 505 aaPredicted RBP17.88■□□□□ 0.45
SORT1-203ENST00000471996 TAS2R50P59544 299 aa17.88■□□□□ 0.45
SORT1-203ENST00000471996 PTK6Q13882 451 aa17.88■□□□□ 0.45
SORT1-203ENST00000471996 NDUFA9Q16795 377 aa17.88■□□□□ 0.45
SORT1-203ENST00000471996 PARP6Q2NL67 630 aa17.88■□□□□ 0.45
SORT1-203ENST00000471996 ZNF534Q76KX8 674 aa17.88■□□□□ 0.45
SORT1-203ENST00000471996 TAOK1Q7L7X3 1001 aa17.88■□□□□ 0.45
SORT1-203ENST00000471996 RPRMLQ8N4K4 120 aa17.88■□□□□ 0.45
SORT1-203ENST00000471996 OR9A4Q8NGU2 314 aa17.88■□□□□ 0.45
SORT1-203ENST00000471996 OR4L1Q8NH43 312 aa17.88■□□□□ 0.45
SORT1-203ENST00000471996 MAGEC3Q8TD91 643 aa17.88■□□□□ 0.45
SORT1-203ENST00000471996 SKA2Q8WVK7 121 aaPredicted RBP17.88■□□□□ 0.45
SORT1-203ENST00000471996 SEC16BQ96JE7 1060 aa17.88■□□□□ 0.45
SORT1-203ENST00000471996 FAM118BQ9BPY3 351 aa17.88■□□□□ 0.45
SORT1-203ENST00000471996 POLDIP3Q9BY77 421 aaKnown RBP17.88■□□□□ 0.45
SORT1-203ENST00000471996 CDCP1Q9H5V8 836 aa17.88■□□□□ 0.45
SORT1-203ENST00000471996 FAM237BA0A1B0GVD1 139 aa17.87■□□□□ 0.45
SORT1-203ENST00000471996 OR2W5A6NFC9 320 aa17.87■□□□□ 0.45
SORT1-203ENST00000471996 TFECO14948 347 aaPredicted RBP17.87■□□□□ 0.45
SORT1-203ENST00000471996 PROM1O43490 865 aa17.87■□□□□ 0.45
SORT1-203ENST00000471996 METTL18O95568 372 aa17.87■□□□□ 0.45
SORT1-203ENST00000471996 EZRP15311 586 aaKnown RBP17.87■□□□□ 0.45
SORT1-203ENST00000471996 SNRPNP63162 240 aaKnown RBP17.87■□□□□ 0.45
SORT1-203ENST00000471996 RELAQ04206 551 aa17.87■□□□□ 0.45
SORT1-203ENST00000471996 PMPCAQ10713 525 aa17.87■□□□□ 0.45
SORT1-203ENST00000471996 SEMA3AQ14563 771 aa17.87■□□□□ 0.45
SORT1-203ENST00000471996 ZNF425Q6IV72 752 aa17.87■□□□□ 0.45
SORT1-203ENST00000471996 PAPD4Q6PIY7 484 aaKnown RBP17.87■□□□□ 0.45
SORT1-203ENST00000471996 RPS19BP1Q86WX3 136 aaKnown RBP17.87■□□□□ 0.45
SORT1-203ENST00000471996 ZNF227Q86WZ6 799 aa17.87■□□□□ 0.45
SORT1-203ENST00000471996 OR8K1Q8NGG5 319 aa17.87■□□□□ 0.45
SORT1-203ENST00000471996 OR51Q1Q8NH59 317 aa17.87■□□□□ 0.45
SORT1-203ENST00000471996 FOPNLQ96NB1 174 aa17.87■□□□□ 0.45
SORT1-203ENST00000471996 DNAJC7Q99615 494 aa17.87■□□□□ 0.45
SORT1-203ENST00000471996 TRIM45Q9H8W5 580 aaPredicted RBP17.87■□□□□ 0.45
SORT1-203ENST00000471996 UTP6Q9NYH9 597 aaKnown RBP17.87■□□□□ 0.45
SORT1-203ENST00000471996 SLC2A6Q9UGQ3 507 aa17.87■□□□□ 0.45
SORT1-203ENST00000471996 PLEKHA6Q9Y2H5 1048 aa17.87■□□□□ 0.45
SORT1-203ENST00000471996 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.87■□□□□ 0.45
SORT1-203ENST00000471996 L3MBTL1Q9Y468 752 aa17.87■□□□□ 0.45
SORT1-203ENST00000471996 SCN2AQ99250 2005 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 NDC80O14777 642 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 CDC40O60508 579 aaKnown RBP eCLIP17.86■□□□□ 0.45
SORT1-203ENST00000471996 PRMT3O60678 531 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 NSA2O95478 260 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms