RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 ARMC10Q8N2F6 343 aa8.34□□□□□ -1.08
CD47-204ENST00000471694 IL17RCQ8NAC3 791 aa8.34□□□□□ -1.08
CD47-204ENST00000471694 OR2T34Q8NGX1 318 aa8.34□□□□□ -1.08
CD47-204ENST00000471694 DNAJC19Q96DA6 116 aa8.34□□□□□ -1.08
CD47-204ENST00000471694 TCF12Q99081 682 aa8.34□□□□□ -1.08
CD47-204ENST00000471694 HCFC1R1Q9NWW0 138 aa8.34□□□□□ -1.08
CD47-204ENST00000471694 PCDHGB7Q9Y5F8 929 aa8.34□□□□□ -1.08
CD47-204ENST00000471694 C10orf71Q711Q0 1435 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 G3V2T6 193 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 ZMPSTE24O75844 475 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 MYOGP15173 224 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 APLNRP35414 380 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 SOX9P48436 509 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 CEBPGP53567 150 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 E2F1Q01094 437 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 VHLLQ6RSH7 139 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 ZNF101Q8IZC7 436 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 TCEANCQ8N8B7 351 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 PRELID2Q8N945 189 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 OR6C4Q8NGE1 309 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 TCEAL3Q969E4 200 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 SFXN2Q96NB2 322 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 A0A0J9YYE9 177 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 BTBD17A6NE02 478 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 K7EPI3 171 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 HLA-DQB2P05538 268 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 MRPS35P82673 323 aaKnown RBP8.33□□□□□ -1.08
CD47-204ENST00000471694 DGUOKQ16854 277 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 RAB11FIP2Q7L804 512 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 FGF13Q92913 245 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 GCDHQ92947 438 aaPredicted RBP8.33□□□□□ -1.08
CD47-204ENST00000471694 MUCL1Q96DR8 90 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 MRPL38Q96DV4 380 aaKnown RBP8.33□□□□□ -1.08
CD47-204ENST00000471694 FER1L6-AS2Q96M78 137 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 CEP295NLQ96MC4 621 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 HBEGFQ99075 208 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 IKZF4Q9H2S9 585 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 TIMMDC1Q9NPL8 285 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 NUP50Q9UKX7 468 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 FAM237BA0A1B0GVD1 139 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 GGT2P36268 569 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 CHRNA4P43681 627 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 FNTBP49356 437 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 RIDAP52758 137 aaKnown RBP8.33□□□□□ -1.08
CD47-204ENST00000471694 TCTE1Q5JU00 501 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 SYPL2Q5VXT5 272 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 CCDC80Q76M96 950 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 NOA1Q8NC60 698 aaKnown RBP8.33□□□□□ -1.08
CD47-204ENST00000471694 OR5AK3PQ8NH89 298 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 CPT1CQ8TCG5 803 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 HDAC7Q8WUI4 952 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 G6PC3Q9BUM1 346 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 SLC7A11Q9UPY5 501 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 U3KQV3 271 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 HTR3EA5X5Y0 456 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 PPEF2O14830 753 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 CD40LGP29965 261 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 NOVA1P51513 510 aaKnown RBP8.33□□□□□ -1.08
CD47-204ENST00000471694 IL18R1Q13478 541 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 RALGPS1Q5JS13 557 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 RBMS3Q6XE24 437 aaKnown RBP8.33□□□□□ -1.08
CD47-204ENST00000471694 SSX6Q7RTT6 188 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 SLC30A8Q8IWU4 369 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 OR2T12Q8NG77 320 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 OR4K14Q8NGD5 310 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 ACMSDQ8TDX5 336 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 RFKQ969G6 155 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 TMEM68Q96MH6 324 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 TBX5Q99593 518 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 HES7Q9BYE0 225 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 ARRDC1-AS1Q9H2J1 176 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 OR51B6Q9H340 312 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 SMOC2Q9H3U7 446 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 TRPV4Q9HBA0 871 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 ERVK-5Q9HDB9 667 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 TMEM9BQ9NQ34 198 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 PDP1Q9P0J1 537 aaPredicted RBP8.33□□□□□ -1.08
CD47-204ENST00000471694 MCTS1Q9ULC4 181 aaKnown RBP8.33□□□□□ -1.08
CD47-204ENST00000471694 RBM47A0AV96 593 aaKnown RBP8.33□□□□□ -1.08
CD47-204ENST00000471694 L7N2F9 121 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 SLC16A5O15375 505 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 ATE1O95260 518 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 C9P02748 559 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 PROCP04070 461 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 TCF4P15884 667 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 RORAP35398 523 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 RNF144AP50876 292 aaPredicted RBP8.33□□□□□ -1.08
CD47-204ENST00000471694 SEC24CP53992 1094 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 VAMP2P63027 116 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 TXNL4AP83876 142 aaKnown RBP8.33□□□□□ -1.08
CD47-204ENST00000471694 RIPK1Q13546 671 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 ITIH4Q14624 930 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 DEFB110Q30KQ9 67 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 FLYWCH1Q4VC44 716 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 SPIN4Q56A73 249 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 ALG10Q5BKT4 473 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 PRPF38BQ5VTL8 546 aaKnown RBP8.33□□□□□ -1.08
CD47-204ENST00000471694 SHISA6Q6ZSJ9 500 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 ABHD12BQ7Z5M8 362 aaPredicted RBP8.33□□□□□ -1.08
CD47-204ENST00000471694 WDR53Q7Z5U6 358 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms