RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 IL17BQ9UHF5 180 aa14.61□□□□□ -0.07
SDC3-203ENST00000471567 CELSR3Q9NYQ7 3312 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 A0A1B0GX78 115 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 HYKKA2RU49 373 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 DSCR3O14972 297 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 STK16O75716 305 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 WDR47O94967 919 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 ONECUT2O95948 504 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 EIF2S1P05198 315 aaKnown RBP14.6□□□□□ -0.07
SDC3-203ENST00000471567 CD63P08962 238 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 RBP1P09455 135 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 F8A1P23610 371 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 RPS15P62841 145 aaKnown RBP14.6□□□□□ -0.07
SDC3-203ENST00000471567 RASA2Q15283 850 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 C18orf21Q32NC0 220 aaPredicted RBP14.6□□□□□ -0.07
SDC3-203ENST00000471567 GARNL3Q5VVW2 1013 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 NXPE4Q6UWF7 544 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 TTLL10Q6ZVT0 673 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 TDRPQ86YL5 185 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 TBC1D19Q8N5T2 526 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 CSNK1A1LQ8N752 337 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 AENQ8WTP8 325 aaKnown RBP14.6□□□□□ -0.07
SDC3-203ENST00000471567 CRELD1Q96HD1 420 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 TMEM79Q9BSE2 394 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 NLNQ9BYT8 704 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 STARD5Q9NSY2 213 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 GPRC5BQ9NZH0 403 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 DHCR7Q9UBM7 475 aaKnown RBP14.6□□□□□ -0.07
SDC3-203ENST00000471567 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.6□□□□□ -0.07
SDC3-203ENST00000471567 LHX6Q9UPM6 363 aa14.6□□□□□ -0.07
SDC3-203ENST00000471567 FARSAQ9Y285 508 aaKnown RBP14.6□□□□□ -0.07
SDC3-203ENST00000471567 V9GYY5 206 aaPredicted RBP14.6□□□□□ -0.07
SDC3-203ENST00000471567 DSPP15924 2871 aaKnown RBP14.59□□□□□ -0.07
SDC3-203ENST00000471567 TRBC2A0A5B9 178 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 SUPT3HB4E1H0 165 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 C9J4A7 227 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 UBXN8O00124 270 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 MAP2K7O14733 419 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 KATNA1O75449 491 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 SUPT3HO75486 399 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 RFPL1O75677 317 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 CAPN1P07384 714 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 PIM1P11309 404 aaPredicted RBP14.59□□□□□ -0.07
SDC3-203ENST00000471567 MTHFD2P13995 350 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 GNAZP19086 355 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 ALAS2P22557 587 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 PTPN4P29074 926 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 HSD17B3P37058 310 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 GDF5P43026 501 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 GLRBP48167 497 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 HSPA7P48741 367 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 CDC16Q13042 620 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 MUM1Q2TAK8 710 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 NKAIN1Q4KMZ8 207 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 CATSPEREQ5SY80 951 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 C1orf189Q5VU69 101 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 LCN10Q6JVE6 187 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 LCA5Q86VQ0 697 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 PLD3Q8IV08 490 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 PLD6Q8N2A8 252 aaKnown RBP14.59□□□□□ -0.07
SDC3-203ENST00000471567 MFSD9Q8NBP5 474 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 ACMSDQ8TDX5 336 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 UBTD2Q8WUN7 234 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 STARD8Q92502 1023 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 EXT2Q93063 718 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 CAVIN3Q969G5 261 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 TSNARE1Q96NA8 513 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 AIF1LQ9BQI0 150 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 PARD6BQ9BYG5 372 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 CD244Q9BZW8 370 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 SYNPO2LQ9H987 977 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 DNAJC11Q9NVH1 559 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 TMCO1Q9UM00 188 aa14.59□□□□□ -0.07
SDC3-203ENST00000471567 KLK8O60259 260 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 LCMT2O60294 686 aaKnown RBP14.58□□□□□ -0.08
SDC3-203ENST00000471567 H2AFYO75367 372 aaKnown RBP14.58□□□□□ -0.08
SDC3-203ENST00000471567 CREG1O75629 220 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 SHBGP04278 402 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 C1GALT1C1LP0DN25 315 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 CXCR2P25025 360 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 BCL6P41182 706 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 RHDQ02161 417 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 TECRLQ5HYJ1 363 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 PRMT9Q6P2P2 845 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 FAM198BQ6UWH4 519 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 SLCO4C1Q6ZQN7 724 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 LRRC70Q7Z2Q7 622 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 VN1R4Q7Z5H5 301 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 SYVN1Q86TM6 617 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 CAMKVQ8NCB2 501 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 TM4SF19Q96DZ7 209 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 MVB12AQ96EY5 273 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 PITHD1Q9GZP4 211 aaPredicted RBP14.58□□□□□ -0.08
SDC3-203ENST00000471567 EHD1Q9H4M9 534 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 NDOR1Q9UHB4 597 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 RAB21Q9UL25 225 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 CDC14AQ9UNH5 594 aa14.58□□□□□ -0.08
SDC3-203ENST00000471567 RUVBL1Q9Y265 456 aaKnown RBP14.58□□□□□ -0.08
SDC3-203ENST00000471567 MDC1Q14676 2089 aaKnown RBP14.57□□□□□ -0.08
SDC3-203ENST00000471567 FEZF1A0PJY2 475 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms