RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 EZRP15311 586 aaKnown RBP12.88□□□□□ -0.35
HMGN1-211ENST00000471260 RGS4P49798 205 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 TAP2Q03519 686 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 OCA2Q04671 838 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 CALCOCO2Q13137 446 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 CRYMQ14894 314 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 TRADDQ15628 312 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 PRTGQ2VWP7 1150 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 COLEC12Q5KU26 742 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 ZNF425Q6IV72 752 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 SUSD1Q6UWL2 747 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 ZDHHC24Q6UX98 284 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 GALNT7Q86SF2 657 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 CNTN4Q8IWV2 1026 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 OR4N4Q8N0Y3 316 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 FAM26EQ8N5C1 309 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 RBMXL3Q8N7X1 1067 aaKnown RBP12.88□□□□□ -0.35
HMGN1-211ENST00000471260 C2CD4AQ8NCU7 369 aaPredicted RBP12.88□□□□□ -0.35
HMGN1-211ENST00000471260 GPR21Q99679 349 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 ACAT2Q9BWD1 397 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 DPH5Q9H2P9 285 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 ZNF552Q9H707 407 aaPredicted RBP12.88□□□□□ -0.35
HMGN1-211ENST00000471260 SLC6A20Q9NP91 592 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 SLAMF7Q9NQ25 335 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 IARS2Q9NSE4 1012 aaKnown RBP12.88□□□□□ -0.35
HMGN1-211ENST00000471260 TAS2R13Q9NYV9 303 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 ZNF282Q9UDV7 671 aaPredicted RBP12.88□□□□□ -0.35
HMGN1-211ENST00000471260 TAC3Q9UHF0 121 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 TSR3Q9UJK0 312 aaKnown RBP12.88□□□□□ -0.35
HMGN1-211ENST00000471260 MAP4K5Q9Y4K4 846 aa12.88□□□□□ -0.35
HMGN1-211ENST00000471260 UBR5O95071 2799 aaPredicted RBP12.88□□□□□ -0.35
HMGN1-211ENST00000471260 IGLV3-12A0A075B6K2 115 aa12.87□□□□□ -0.35
HMGN1-211ENST00000471260 IGKV1-8A0A0C4DH67 115 aa12.87□□□□□ -0.35
HMGN1-211ENST00000471260 H0YGG7 62 aa12.87□□□□□ -0.35
HMGN1-211ENST00000471260 PCDH17O14917 1159 aa12.87□□□□□ -0.35
HMGN1-211ENST00000471260 EIF2S1P05198 315 aaKnown RBP12.87□□□□□ -0.35
HMGN1-211ENST00000471260 ARF3P61204 181 aaPredicted RBP12.87□□□□□ -0.35
HMGN1-211ENST00000471260 MORF4L2Q15014 288 aa12.87□□□□□ -0.35
HMGN1-211ENST00000471260 SLC6A19Q695T7 634 aa12.87□□□□□ -0.35
HMGN1-211ENST00000471260 UBE2R2Q712K3 238 aaPredicted RBP12.87□□□□□ -0.35
HMGN1-211ENST00000471260 TAOK1Q7L7X3 1001 aa12.87□□□□□ -0.35
HMGN1-211ENST00000471260 PAQR7Q86WK9 346 aa12.87□□□□□ -0.35
HMGN1-211ENST00000471260 LRRC56Q8IYG6 542 aaPredicted RBP12.87□□□□□ -0.35
HMGN1-211ENST00000471260 PDIK1LQ8N165 341 aa12.87□□□□□ -0.35
HMGN1-211ENST00000471260 MCOLN3Q8TDD5 553 aa12.87□□□□□ -0.35
HMGN1-211ENST00000471260 RERGQ96A58 199 aaPredicted RBP12.87□□□□□ -0.35
HMGN1-211ENST00000471260 COL26A1Q96A83 441 aa12.87□□□□□ -0.35
HMGN1-211ENST00000471260 LRRC39Q96DD0 335 aa12.87□□□□□ -0.35
HMGN1-211ENST00000471260 OR2A5Q96R48 311 aa12.87□□□□□ -0.35
HMGN1-211ENST00000471260 CCT8L2Q96SF2 557 aa12.87□□□□□ -0.35
HMGN1-211ENST00000471260 PCBD2Q9H0N5 130 aa12.87□□□□□ -0.35
HMGN1-211ENST00000471260 TRMT6Q9UJA5 497 aaKnown RBP12.87□□□□□ -0.35
HMGN1-211ENST00000471260 PCSK5Q92824 1860 aa12.87□□□□□ -0.35
HMGN1-211ENST00000471260 HEATR5BQ9P2D3 2071 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 SOCS6O14544 535 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 SLC16A5O15375 505 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 C8GP07360 202 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 CCND1P24385 295 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 IVDP26440 423 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 OR1D4P47884 311 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 YBX1P67809 324 aaKnown RBP12.86□□□□□ -0.35
HMGN1-211ENST00000471260 MPP1Q00013 466 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 GUCY1A3Q02108 690 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 SP140Q13342 867 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 TSTA3Q13630 321 aaPredicted RBP12.86□□□□□ -0.35
HMGN1-211ENST00000471260 FAM53BQ14153 422 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 INPP5JQ15735 1006 aaPredicted RBP12.86□□□□□ -0.35
HMGN1-211ENST00000471260 TNFAIP8L3Q5GJ75 292 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 PRAMEF13Q5VWM6 474 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 KIRREL2Q6UWL6 708 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 PALM2Q8IXS6 379 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 CPNE9Q8IYJ1 553 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 ZADH2Q8N4Q0 377 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 CSNK1A1LQ8N752 337 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 Q8NA96 180 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 FBXO25Q8TCJ0 367 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 STT3BQ8TCJ2 826 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.86□□□□□ -0.35
HMGN1-211ENST00000471260 MIEF2Q96C03 454 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 CABS1Q96KC9 395 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 CCDC138Q96M89 665 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 NSRP1Q9H0G5 558 aaKnown RBP12.86□□□□□ -0.35
HMGN1-211ENST00000471260 EPB41L4BQ9H329 900 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 TMEM184CQ9NVA4 438 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 CTSFQ9UBX1 484 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 FBXL4Q9UKA2 621 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 CORO1CQ9ULV4 474 aaPredicted RBP12.86□□□□□ -0.35
HMGN1-211ENST00000471260 B3GNT3Q9Y2A9 372 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 HS3ST3B1Q9Y662 390 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 MAU2Q9Y6X3 613 aa12.86□□□□□ -0.35
HMGN1-211ENST00000471260 KCNE1BA0A087WTH5 132 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 NRP2O60462 931 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 AHSGP02765 367 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 ZGLP1P0C6A0 271 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 ATXN8OSP0DMR3 200 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 FBLP22087 321 aaKnown RBP12.85□□□□□ -0.35
HMGN1-211ENST00000471260 ITGA3P26006 1051 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 IMPA1P29218 277 aa12.85□□□□□ -0.35
HMGN1-211ENST00000471260 HPDP32754 393 aaPredicted RBP12.85□□□□□ -0.35
HMGN1-211ENST00000471260 RPL21P46778 160 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms