RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 ZNF177Q13360 481 aaPredicted RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 TRA2AQ13595 282 aaKnown RBP eCLIP1.13□□□□□ -2.232e-8■□□□□ 11.1
UBXN4-207ENST00000471246 PTPN14Q15678 1187 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 VWC2Q2TAL6 325 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 MS4A18Q3C1V0 323 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 RNF212Q495C1 297 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 EIPR1Q53HC9 387 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 OR4C11Q6IEV9 310 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 FAM198BQ6UWH4 519 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 CDHR3Q6ZTQ4 885 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 CAMKMTQ7Z624 323 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 CENPVQ7Z7K6 275 aaPredicted RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 ADGRA1Q86SQ6 560 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 RYBPQ8N488 228 aaPredicted RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 FAM89BQ8N5H3 189 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 LRTM2Q8N967 370 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 RASGEF1AQ8N9B8 481 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 TC2NQ8N9U0 490 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 TDRD5Q8NAT2 981 aaKnown RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 SUMF1Q8NBK3 374 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 NOA1Q8NC60 698 aaKnown RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 TSPAN14Q8NG11 270 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 OR10G7Q8NGN6 311 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 TSACCQ96A04 125 aaPredicted RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 OTUB1Q96FW1 271 aaPredicted RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 ZNF414Q96IQ9 312 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 C1orf147Q96MC9 270 aaPredicted RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 MUS81Q96NY9 551 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 KLHL5Q96PQ7 755 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 GCNAQ96QF7 691 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 CPNE1Q99829 537 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 ATF6BQ99941 703 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 PI4K2AQ9BTU6 479 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 CCDC106Q9BWC9 280 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 SLC2A11Q9BYW1 496 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 KLHL4Q9C0H6 718 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 DNAI2Q9GZS0 605 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 NOL11Q9H8H0 719 aaKnown RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 CDH20Q9HBT6 801 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 NSMCE4AQ9NXX6 385 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 HAO2Q9NYQ3 351 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 GTSE1Q9NYZ3 720 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 THAP10Q9P2Z0 257 aaPredicted RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 PRDM4Q9UKN5 801 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 ELF5Q9UKW6 265 aaPredicted RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 MAGED1Q9Y5V3 778 aaPredicted RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 STYXL1Q9Y6J8 313 aa1.13□□□□□ -2.23
UBXN4-207ENST00000471246 RSF1Q96T23 1441 aaPredicted RBP1.13□□□□□ -2.23
UBXN4-207ENST00000471246 IGLV4-3A0A075B6K6 122 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 IGHV3-20A0A0C4DH32 117 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 IGHV3-38A0A0C4DH36 116 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 EDDM13A0A1B0GTR0 161 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 hCG_1809904A0A1W2PP81 198 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 A0A1W2PPE2 198 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 A0A1W2PR64 198 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 MTMR11A4FU01 709 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 PHOX2AO14813 284 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 PHF1O43189 567 aaPredicted RBP1.12□□□□□ -2.23
UBXN4-207ENST00000471246 TLX2O43763 284 aaPredicted RBP1.12□□□□□ -2.23
UBXN4-207ENST00000471246 ECE2O60344 883 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 SNX3O60493 162 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 ZNF354AO60765 605 aaPredicted RBP1.12□□□□□ -2.23
UBXN4-207ENST00000471246 RPS6KA5O75582 802 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 ATP6AP2O75787 350 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 GSRP00390 522 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 SAGP10523 405 aaPredicted RBP1.12□□□□□ -2.23
UBXN4-207ENST00000471246 GP9P14770 177 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 MYOGP15173 224 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 SELEP16581 610 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 AOC1P19801 751 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 AADACP22760 399 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 AZGP1P25311 298 aaKnown RBP1.12□□□□□ -2.23
UBXN4-207ENST00000471246 ALDH1B1P30837 517 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 PCGF2P35227 344 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 NNMTP40261 264 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 LMAN1P49257 510 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 ASCL1P50553 236 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 ATP4BP51164 291 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 CCR3P51677 355 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 NDST2P52849 883 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 OR1D5P58170 312 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 FKBP3Q00688 224 aaKnown RBP1.12□□□□□ -2.23
UBXN4-207ENST00000471246 RASGEF1BQ0VAM2 473 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 SNTB1Q13884 538 aaKnown RBP1.12□□□□□ -2.23
UBXN4-207ENST00000471246 KIAA0141Q14154 515 aaPredicted RBP1.12□□□□□ -2.23
UBXN4-207ENST00000471246 PTPRCAPQ14761 206 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 OPCMLQ14982 345 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 NONOQ15233 471 aaKnown RBP eCLIP1.12□□□□□ -2.23
UBXN4-207ENST00000471246 LETM2Q2VYF4 491 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 BMP2KLQ5H9B9 411 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 SPECC1Q5M775 1068 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 HYIQ5T013 277 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 CTR9Q6PD62 1173 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 C3P1Q6ZMU1 363 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 ZBTB49Q6ZSB9 765 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 DET1Q7L5Y6 550 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 TIPARPQ7Z3E1 657 aaKnown RBP1.12□□□□□ -2.23
UBXN4-207ENST00000471246 CEACAM19Q7Z692 300 aa1.12□□□□□ -2.23
UBXN4-207ENST00000471246 RNF130Q86XS8 419 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms