RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-209	ENST00000470247	KNTC1	P50748	2209 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	IGHV5-10-1	A0A0J9YXX1	117 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	TRBC2	A0A5B9	178 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	FEZF1	A0PJY2	475 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247		D6RAR5	112 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	MANBA	O00462	879 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	FFAR3	O14843	346 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	SLC30A4	O14863	429 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	HAT1	O14929	419 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	AZIN1	O14977	448 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	GPR42	O15529	346 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	ZW10	O43264	779 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	SHOX2	O60902	331 aa	Predicted RBP	10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	SNUPN	O95149	360 aa	Known RBP	10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	JUN	P05412	331 aa	Known RBP	10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	ENO1	P06733	434 aa	Known RBP	10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	UROS	P10746	265 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	THRA	P10827	490 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	HGF	P14210	728 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	CSRP1	P21291	193 aa	Known RBP	10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	CDH3	P22223	829 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	BCL6	P41182	706 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	HNF4A	P41235	474 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	SCTR	P47872	440 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	HTR6	P50406	440 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	RPL14	P50914	215 aa	Known RBP	10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	PDX1	P52945	283 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	ILK	Q13418	452 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	SH2D4B	Q5SQS7	431 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	CACHD1	Q5VU97	1274 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	MAVS	Q7Z434	540 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	CARF	Q8N187	725 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	DNAJC22	Q8N4W6	341 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	C19orf47	Q8N9M1	422 aa	Known RBP	10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	OR7G3	Q8NG95	312 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	METTL6	Q8TCB7	284 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	AGR3	Q8TD06	166 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	USP7	Q93009	1102 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	SLC41A2	Q96JW4	573 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	FCRL4	Q96PJ5	515 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	OR2A5	Q96R48	311 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	DPYSL5	Q9BPU6	564 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	AIF1L	Q9BQI0	150 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	EFCAB11	Q9BUY7	163 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	PITHD1	Q9GZP4	211 aa	Predicted RBP	10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	RHBG	Q9H310	441 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	FARSB	Q9NSD9	589 aa	Known RBP	10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	KLHL3	Q9UH77	587 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	BTRC	Q9Y297	605 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	TSC22D4	Q9Y3Q8	395 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	DNAJC15	Q9Y5T4	150 aa		10.79	□□□□□ -0.68
SREBF1-209	ENST00000470247	LOC105369274	A0A096LPK9	316 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	LOC102723532	A0A0G2JNH3	316 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	TOX3	O15405	576 aa	Predicted RBP	10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	RFPL3	O75679	317 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	ANKRD34C	P0C6C1	535 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	DRD4	P21917	467 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	NEK2	P51955	445 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	E2F1	Q01094	437 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	INSM1	Q01101	510 aa	Predicted RBP	10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	LAPTM5	Q13571	262 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	SNAP47	Q5SQN1	464 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	CDCP2	Q5VXM1	449 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	FRG2	Q64ET8	278 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	MED27	Q6P2C8	311 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	TMIGD1	Q6UXZ0	262 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	RNF165	Q6ZSG1	346 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	RNF44	Q7L0R7	432 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	VN1R4	Q7Z5H5	301 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	B3GNT8	Q7Z7M8	397 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	MYLK4	Q86YV6	388 aa	Predicted RBP	10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	CRLF3	Q8IUI8	442 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	WDR75	Q8IWA0	830 aa	Known RBP	10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	OR4N4	Q8N0Y3	316 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	D2HGDH	Q8N465	521 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	RNF175	Q8N4F7	328 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	PIWIL2	Q8TC59	973 aa	Known RBP	10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	CREB3L4	Q8TEY5	395 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	ZNF473	Q8WTR7	871 aa	Known RBP	10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	TM4SF19	Q96DZ7	209 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	CHMP6	Q96FZ7	201 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	MAGEB10	Q96LZ2	347 aa	Predicted RBP	10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	FRG2B	Q96QU4	278 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	GFM1	Q96RP9	751 aa	Known RBP	10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	SLC29A3	Q9BZD2	475 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	AICDA	Q9GZX7	198 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	KCNK13	Q9HB14	408 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	FGFR1OP2	Q9NVK5	253 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	MARCO	Q9UEW3	520 aa	Predicted RBP	10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	CCL27	Q9Y4X3	112 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	PCDHGA4	Q9Y5G9	962 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	PCDHGA11	Q9Y5H2	935 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247	PTGDR2	Q9Y5Y4	395 aa		10.78	□□□□□ -0.68
SREBF1-209	ENST00000470247		A0A0J9YVX5	310 aa		10.77	□□□□□ -0.69
SREBF1-209	ENST00000470247	SERTM1	A2A2V5	107 aa		10.77	□□□□□ -0.69
SREBF1-209	ENST00000470247	GMNC	A6NCL1	334 aa		10.77	□□□□□ -0.69
SREBF1-209	ENST00000470247	SRRM3	A6NNA2	597 aa	Predicted RBP	10.77	□□□□□ -0.69
SREBF1-209	ENST00000470247		A8MU76	341 aa		10.77	□□□□□ -0.69
SREBF1-209	ENST00000470247		H3BMH7	237 aa		10.77	□□□□□ -0.69
SREBF1-209	ENST00000470247	GIPC1	O14908	333 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms