RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 DEFB109BQ30KR1 87 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.89□□□□□ -0.19
COL27A1-203ENST00000468565 SPDYAQ5MJ70 313 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 ATP1A1-AS1Q5TC04 95 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 TLDC1Q6P9B6 456 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 TRMT10BQ6PF06 316 aaKnown RBP13.89□□□□□ -0.19
COL27A1-203ENST00000468565 KIAA0408Q6ZU52 694 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 SYTL1Q8IYJ3 562 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 C2orf73Q8N5S3 287 aaPredicted RBP13.89□□□□□ -0.19
COL27A1-203ENST00000468565 LMNTD1Q8N9Z9 388 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 FBXO15Q8NCQ5 510 aaPredicted RBP13.89□□□□□ -0.19
COL27A1-203ENST00000468565 GIMAP7Q8NHV1 300 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 APOBEC4Q8WW27 367 aaKnown RBP13.89□□□□□ -0.19
COL27A1-203ENST00000468565 INPP5DQ92835 1189 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 SLC30A3Q99726 388 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 AARSD1Q9BTE6 412 aaKnown RBP13.89□□□□□ -0.19
COL27A1-203ENST00000468565 MYLK2Q9H1R3 596 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 C12orf65Q9H3J6 166 aaKnown RBP13.89□□□□□ -0.19
COL27A1-203ENST00000468565 NPHS2Q9NP85 383 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 STARD5Q9NSY2 213 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.89□□□□□ -0.19
COL27A1-203ENST00000468565 POLHQ9Y253 713 aa13.89□□□□□ -0.19
COL27A1-203ENST00000468565 FARSAQ9Y285 508 aaKnown RBP13.89□□□□□ -0.19
COL27A1-203ENST00000468565 ARHGEF33A8MVX0 844 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 B8ZZF3 427 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 KLF11O14901 512 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 HCRTR1O43613 425 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 RFPL1O75677 317 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 CATP04040 527 aaKnown RBP13.88□□□□□ -0.19
COL27A1-203ENST00000468565 CBSLP0DN79 551 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 CBSP35520 551 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 KCNAB2Q13303 367 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 ZNF385CQ66K41 422 aaPredicted RBP13.88□□□□□ -0.19
COL27A1-203ENST00000468565 TIFABQ6ZNK6 161 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 GALNT7Q86SF2 657 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 FAM20CQ8IXL6 584 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 OR9A1PQ8NGU1 263 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 PROKR1Q8TCW9 393 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 CD200R1Q8TD46 325 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 ZUFSPQ96AP4 578 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 ERP27Q96DN0 273 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 CERS2Q96G23 380 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 NLNQ9BYT8 704 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 SPRTNQ9H040 489 aaPredicted RBP13.88□□□□□ -0.19
COL27A1-203ENST00000468565 TSR3Q9UJK0 312 aaKnown RBP13.88□□□□□ -0.19
COL27A1-203ENST00000468565 SRPK3Q9UPE1 567 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 PLLPQ9Y342 182 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 KLK4Q9Y5K2 254 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 CDC14CA4D256 554 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 TARM1B6A8C7 271 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 ZSCAN9O15535 394 aaPredicted RBP13.88□□□□□ -0.19
COL27A1-203ENST00000468565 VPS26AO75436 327 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 UNC5CO95185 931 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 TGDSO95455 350 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 ERVK-10P10266 1014 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 MNAT1P51948 309 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 BMPR2Q13873 1038 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 ARHGAP19Q14CB8 494 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 UGT8Q16880 541 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 ZC3H12BQ5HYM0 836 aaKnown RBP13.88□□□□□ -0.19
COL27A1-203ENST00000468565 RHBDD2Q6NTF9 364 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 UGT3A1Q6NUS8 523 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 FAM198BQ6UWH4 519 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 RAB3IPQ96QF0 476 aaPredicted RBP13.88□□□□□ -0.19
COL27A1-203ENST00000468565 GPR21Q99679 349 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 SLC25A18Q9H1K4 315 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 ENAMQ9NRM1 1142 aa13.88□□□□□ -0.19
COL27A1-203ENST00000468565 BOD1L1Q8NFC6 3051 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 A0A1W2PPV9 198 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 CAPN1P07384 714 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 FURINP09958 794 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 AGXTP21549 392 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 BGNP21810 368 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 CRHR1P34998 444 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 HSD17B2P37059 387 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 RIPK1Q13546 671 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 NAA25Q14CX7 972 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 ATG16L1Q676U5 607 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 FCRL6Q6DN72 434 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 LCN10Q6JVE6 187 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 LRRC8EQ6NSJ5 796 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 FIGLAQ6QHK4 219 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 ASRGL1Q7L266 308 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 ZNF605Q86T29 641 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 OR2A1Q8NGT9 310 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 ACMSDQ8TDX5 336 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 C17orf62Q9BQA9 187 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 KLHL20Q9Y2M5 609 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 KCNMB2Q9Y691 235 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 MED13Q9UHV7 2174 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 NUP210LQ5VU65 1888 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 SPTA1P02549 2419 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 ZNF462Q96JM2 2506 aa13.87□□□□□ -0.19
COL27A1-203ENST00000468565 KRT87PA6NCN2 255 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 ZNF839A8K0R7 811 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 GFYI3L273 518 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 GRIA3P42263 894 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 GCGRP47871 477 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 RPS18P62269 152 aaKnown RBP13.86□□□□□ -0.19
COL27A1-203ENST00000468565 KCNJ2P63252 427 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms