RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 FAM47EQ6ZV65 393 aa11.62□□□□□ -0.55
CTNS-205ENST00000467663 TIPARPQ7Z3E1 657 aaKnown RBP11.62□□□□□ -0.55
CTNS-205ENST00000467663 SPATA21Q7Z572 469 aa11.62□□□□□ -0.55
CTNS-205ENST00000467663 VRK3Q8IV63 474 aa11.62□□□□□ -0.55
CTNS-205ENST00000467663 NLGN4XQ8N0W4 816 aa11.62□□□□□ -0.55
CTNS-205ENST00000467663 SPDYE1Q8NFV5 336 aaPredicted RBP11.62□□□□□ -0.55
CTNS-205ENST00000467663 NLGN4YQ8NFZ3 816 aaPredicted RBP11.62□□□□□ -0.55
CTNS-205ENST00000467663 ZNF483Q8TF39 744 aaPredicted RBP11.62□□□□□ -0.55
CTNS-205ENST00000467663 NAT14Q8WUY8 206 aa11.62□□□□□ -0.55
CTNS-205ENST00000467663 TFGQ92734 400 aaPredicted RBP11.62□□□□□ -0.55
CTNS-205ENST00000467663 CD244Q9BZW8 370 aa11.62□□□□□ -0.55
CTNS-205ENST00000467663 WWP1Q9H0M0 922 aa11.62□□□□□ -0.55
CTNS-205ENST00000467663 TRIT1Q9H3H1 467 aaKnown RBP11.62□□□□□ -0.55
CTNS-205ENST00000467663 GSTO2Q9H4Y5 243 aa11.62□□□□□ -0.55
CTNS-205ENST00000467663 SLCO1B3Q9NPD5 702 aa11.62□□□□□ -0.55
CTNS-205ENST00000467663 IMP3Q9NV31 184 aaKnown RBP11.62□□□□□ -0.55
CTNS-205ENST00000467663 WWOXQ9NZC7 414 aa11.62□□□□□ -0.55
CTNS-205ENST00000467663 SPATA7Q9P0W8 599 aa11.62□□□□□ -0.55
CTNS-205ENST00000467663 OPTCQ9UBM4 332 aa11.62□□□□□ -0.55
CTNS-205ENST00000467663 IKZF3Q9UKT9 509 aa11.62□□□□□ -0.55
CTNS-205ENST00000467663 BAHCC1Q9P281 2608 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 TRPC5OSA6NMA1 111 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 K7EPI3 171 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 MYO1CO00159 1063 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 UGDHO60701 494 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 RASSF9O75901 435 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 OTCP00480 354 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 ALOX15P16050 662 aaPredicted RBP11.61□□□□□ -0.55
CTNS-205ENST00000467663 NELFEP18615 380 aaKnown RBP11.61□□□□□ -0.55
CTNS-205ENST00000467663 EEF1DP29692 281 aaKnown RBP11.61□□□□□ -0.55
CTNS-205ENST00000467663 PDHA2P29803 388 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 PREPP48147 710 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 SEPHS1P49903 392 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 SH3BP2P78314 561 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 PCDH1Q08174 1060 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 ABHD18Q0P651 414 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 ABRQ12979 859 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 TBR1Q16650 682 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 PHKG1Q16816 387 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 IRGCQ6NXR0 463 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 NAPRTQ6XQN6 538 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 FAM92BQ6ZTR7 304 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 CLYBLQ8N0X4 340 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 LILRA3Q8N6C8 439 aaPredicted RBP11.61□□□□□ -0.55
CTNS-205ENST00000467663 EXD3Q8N9H8 876 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 CCDC197Q8NCU1 140 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 OR9A1PQ8NGU1 263 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 OR5K2Q8NHB8 316 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 DLG3Q92796 817 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 EXTL1Q92935 676 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 EXT2Q93063 718 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 SLC45A3Q96JT2 553 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 SLC41A2Q96JW4 573 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 RMDN2Q96LZ7 410 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 C12orf66Q96MD2 445 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 OR6C1Q96RD1 312 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 ZNF382Q96SR6 550 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 SORT1Q99523 831 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 ELAC2Q9BQ52 826 aaKnown RBP11.61□□□□□ -0.55
CTNS-205ENST00000467663 KIR3DX1Q9H7L2 352 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 LNPEPQ9UIQ6 1025 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 PCTPQ9UKL6 214 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 ADAMTS6Q9UKP5 1117 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 ASF1AQ9Y294 204 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 ARL2BPQ9Y2Y0 163 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 ANGPTL3Q9Y5C1 460 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 CFAP20Q9Y6A4 193 aaKnown RBP11.61□□□□□ -0.55
CTNS-205ENST00000467663 USH1CQ9Y6N9 552 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 COLEC10Q9Y6Z7 277 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 KALRNO60229 2985 aa11.61□□□□□ -0.55
CTNS-205ENST00000467663 LOC101059948A0A1B0GTJ6 334 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 OR5K3A6NET4 321 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 ARHGEF33A8MVX0 844 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 E2F3O00716 465 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 HDAC3O15379 428 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 ITM2AO43736 263 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 GUCA1CO95843 209 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 ENO1P06733 434 aaKnown RBP11.6□□□□□ -0.55
CTNS-205ENST00000467663 FGF5P12034 268 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 EPB42P16452 691 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 ZNF28P17035 718 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 PPP1CAP62136 330 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 CYP4F2P78329 520 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 IRX1P78414 480 aaPredicted RBP11.6□□□□□ -0.55
CTNS-205ENST00000467663 ZNF33BQ06732 778 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 FOXM1Q08050 763 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 PLCL1Q15111 1095 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 DUS1LQ6P1R4 473 aaKnown RBP11.6□□□□□ -0.55
CTNS-205ENST00000467663 ZNF605Q86T29 641 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 KMT5CQ86Y97 462 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 ESX1Q8N693 406 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 CD180Q99467 661 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 MIPEPQ99797 713 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 HGH1Q9BTY7 390 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 EFHD1Q9BUP0 239 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 NTMT1Q9BV86 223 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 FAM107BQ9H098 131 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 PCBD2Q9H0N5 130 aa11.6□□□□□ -0.55
CTNS-205ENST00000467663 UTP6Q9NYH9 597 aaKnown RBP11.6□□□□□ -0.55
CTNS-205ENST00000467663 GPRC5BQ9NZH0 403 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms