RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 KLK1P06870 262 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 ALPIP09923 528 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 IQCF3P0C7M6 154 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 CBSLP0DN79 551 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 CBSP35520 551 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 SLC1A2P43004 574 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 TEAD2Q15562 447 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 PRRT3Q5FWE3 981 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 ARL13AQ5H913 290 aaPredicted RBP8.48□□□□□ -1.05
HPS4-209ENST00000466781 LRIF1Q5T3J3 769 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 NIPAL1Q6NVV3 410 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 INO80EQ8NBZ0 244 aaPredicted RBP8.48□□□□□ -1.05
HPS4-209ENST00000466781 OR4E2Q8NGC2 313 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 THEM6Q8WUY1 208 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 C7orf26Q96N11 449 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 EFCAB11Q9BUY7 163 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 TRPV4Q9HBA0 871 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 PARPBPQ9NWS1 579 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 POU2F3Q9UKI9 436 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 ORC5O43913 435 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 LRCH4O75427 683 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 PGLSO95336 258 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 ECH1Q13011 328 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 SCGB2B2Q4G0G5 96 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 CRB2Q5IJ48 1285 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 CLEC12AQ5QGZ9 265 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 FRMD7Q6ZUT3 714 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 SLC44A3Q8N4M1 653 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 KCTD13Q8WZ19 329 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 CPT1BQ92523 772 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 CENPNQ96H22 339 aaPredicted RBP8.48□□□□□ -1.05
HPS4-209ENST00000466781 ZFP3Q96NJ6 502 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 CYP2S1Q96SQ9 504 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 ACTL8Q9H568 366 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 ZNF224Q9NZL3 707 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 MED11Q9P086 117 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 GRHPRQ9UBQ7 328 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 PCDHGA6Q9Y5G7 932 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 CFAP20Q9Y6A4 193 aaKnown RBP8.48□□□□□ -1.05
HPS4-209ENST00000466781 PMF1-BGLAPU3KQ54 211 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 A0A1B0GVI7 797 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 C9JVG2 144 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 FHP07954 510 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 S100A10P60903 97 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 ELOCQ15369 112 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 SLC10A6Q3KNW5 377 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 IQCCQ4KMZ1 466 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 FSTL4Q6MZW2 842 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 SLC22A8Q8TCC7 542 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 SPOCK2Q92563 424 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 KCNH6Q9H252 994 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 ASB6Q9NWX5 421 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 AASSQ9UDR5 926 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 MAFFQ9ULX9 164 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 TCRBV21S2A2A0A5A6 115 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 FABP12A6NFH5 140 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 UPK3BL1B0FP48 263 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 UPK3BL2E5RIL1 263 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 INMTO95050 263 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 STATHP02808 62 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 CYBAP13498 195 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 IRF2P14316 349 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 HERV-K104P61576 105 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 MAD2L1BPQ15013 274 aaPredicted RBP8.47□□□□□ -1.05
HPS4-209ENST00000466781 PCBP2Q15366 365 aaKnown RBP eCLIP8.47□□□□□ -1.05
HPS4-209ENST00000466781 CA9Q16790 459 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 RUNDC3AQ59EK9 446 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 C3orf33Q6P1S2 294 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 ZNF662Q6ZS27 426 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 CENPSQ8N2Z9 138 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 ANKLE1Q8NAG6 615 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 EZH1Q92800 747 aaPredicted RBP8.47□□□□□ -1.05
HPS4-209ENST00000466781 KCNJ9Q92806 393 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 IRF7Q92985 503 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 KLHDC7BQ96G42 594 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 STRA6Q9BX79 667 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 SLC5A7Q9GZV3 580 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 POLR2J3Q9H1A7 115 aaKnown RBP8.47□□□□□ -1.05
HPS4-209ENST00000466781 SFXN1Q9H9B4 322 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 STOX2Q9P2F5 926 aaPredicted RBP8.47□□□□□ -1.05
HPS4-209ENST00000466781 VPS29Q9UBQ0 182 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 N4BP2Q86UW6 1770 aaPredicted RBP8.47□□□□□ -1.05
HPS4-209ENST00000466781 COL22A1Q8NFW1 1626 aaPredicted RBP8.47□□□□□ -1.05
HPS4-209ENST00000466781 GRXCR1A8MXD5 290 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 MMP20O60882 483 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 PEX14O75381 377 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 RCBTB2O95199 551 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 AHSA1O95433 338 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 MT-ND1P03886 318 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 SOD2P04179 222 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 ST3GAL4Q11206 333 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 VWA5B1Q5TIE3 1220 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 MAMDC4Q6UXC1 1216 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 YTHDF3Q7Z739 585 aaKnown RBP8.47□□□□□ -1.05
HPS4-209ENST00000466781 TDRPQ86YL5 185 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 OR8H1Q8NGG4 311 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 CEP76Q8TAP6 659 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 SNTG1Q9NSN8 517 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 B4GALT7Q9UBV7 327 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 CHD4Q14839 1912 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms