RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 TBCEQ15813 527 aaPredicted RBP3.36□□□□□ -1.87
SORT1-202ENST00000466471 UBE2SQ16763 222 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 RGS21Q2M5E4 152 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 QRICH1Q2TAL8 776 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 BTBD16Q32M84 506 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 CEP55Q53EZ4 464 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 COQ5Q5HYK3 327 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 ATXN7L2Q5T6C5 722 aaPredicted RBP3.36□□□□□ -1.87
SORT1-202ENST00000466471 CACHD1Q5VU97 1274 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 ANKRD22Q5VYY1 191 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 KIAA1614Q5VZ46 1190 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 HMBOX1Q6NT76 420 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 TAPT1Q6NXT6 567 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 TTC23LQ6PF05 361 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 SLC2A7Q6PXP3 512 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 LAYNQ6UX15 382 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 FAM83HQ6ZRV2 1179 aaPredicted RBP3.36□□□□□ -1.87
SORT1-202ENST00000466471 DENND5BQ6ZUT9 1274 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 LARP4Q71RC2 724 aaKnown RBP eCLIP3.36□□□□□ -1.87
SORT1-202ENST00000466471 SYT13Q7L8C5 426 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 GPRIN1Q7Z2K8 1008 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 GPR141Q7Z602 305 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 CAND1Q86VP6 1230 aaKnown RBP3.36□□□□□ -1.87
SORT1-202ENST00000466471 HPS6Q86YV9 775 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 MMAAQ8IVH4 418 aaKnown RBP3.36□□□□□ -1.87
SORT1-202ENST00000466471 IGDCC3Q8IVU1 814 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 DEFB107AQ8IZN7 70 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 DSELQ8IZU8 1212 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 KLHL36Q8N4N3 616 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 CHCHD4Q8N4Q1 142 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 ARFGAP1Q8N6T3 406 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 TMEM161BQ8NDZ6 487 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 OR13F1Q8NGS4 319 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 ANGPTL6Q8NI99 470 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 SUN3Q8TAQ9 357 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 GSDMBQ8TAX9 411 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 RDH11Q8TC12 318 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 POC1BQ8TC44 478 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 ACTL9Q8TC94 416 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 BPIFB1Q8TDL5 484 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 RAB2BQ8WUD1 216 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 PDCD6IPQ8WUM4 868 aaKnown RBP3.36□□□□□ -1.87
SORT1-202ENST00000466471 HMGB4Q8WW32 186 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 FKBP10Q96AY3 582 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 C12orf43Q96C57 262 aaKnown RBP3.36□□□□□ -1.87
SORT1-202ENST00000466471 RMND5BQ96G75 393 aaPredicted RBP3.36□□□□□ -1.87
SORT1-202ENST00000466471 TXNDC15Q96J42 360 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 RDH12Q96NR8 316 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 LENG8Q96PV6 779 aaPredicted RBP3.36□□□□□ -1.87
SORT1-202ENST00000466471 GCNAQ96QF7 691 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 EBNA1BP2Q99848 306 aaKnown RBP3.36□□□□□ -1.87
SORT1-202ENST00000466471 PKP2Q99959 881 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 MYOCQ99972 504 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 EBF4Q9BQW3 602 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 CBWD1Q9BRT8 395 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 CENPOQ9BU64 300 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 PTDSS2Q9BVG9 487 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 NPLQ9BXD5 320 aaPredicted RBP3.36□□□□□ -1.87
SORT1-202ENST00000466471 ITPAQ9BY32 194 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 SEMA4CQ9C0C4 833 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 REXO4Q9GZR2 422 aaKnown RBP3.36□□□□□ -1.87
SORT1-202ENST00000466471 OR10A4Q9H209 315 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 ARRDC1-AS1Q9H2J1 176 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 CPVLQ9H3G5 476 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 TPK1Q9H3S4 243 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 GSTO2Q9H4Y5 243 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 RMND5AQ9H871 391 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 NANOGQ9H9S0 305 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 PARVBQ9HBI1 364 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 CPNE5Q9HCH3 593 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 TRPC7Q9HCX4 862 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 ACP6Q9NPH0 428 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 FSCN3Q9NQT6 498 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 GID8Q9NWU2 228 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 ARHGEF38Q9NXL2 777 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 NPAP1Q9NZP6 1156 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 TMEM181Q9P2C4 612 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 MARCH4Q9P2E8 410 aaPredicted RBP3.36□□□□□ -1.87
SORT1-202ENST00000466471 COPG2Q9UBF2 871 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 ADAM29Q9UKF5 820 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 PSME2Q9UL46 239 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 PCDHGB4Q9UN71 923 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 FAF1Q9UNN5 650 aaPredicted RBP3.36□□□□□ -1.87
SORT1-202ENST00000466471 USP22Q9UPT9 525 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 ERVK-11Q9UQG0 969 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 MTF2Q9Y483 593 aaPredicted RBP3.36□□□□□ -1.87
SORT1-202ENST00000466471 TCAF1Q9Y4C2 921 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 PCDHGB5Q9Y5G0 923 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 ENTPD2Q9Y5L3 495 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 RAD54BQ9Y620 910 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 CPQQ9Y646 472 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 IKBKGQ9Y6K9 419 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 A3GALT2U3KPV4 340 aa3.36□□□□□ -1.87
SORT1-202ENST00000466471 PKD1L1Q8TDX9 2849 aa3.35□□□□□ -1.87
SORT1-202ENST00000466471 COL6A5A8TX70 2615 aa3.35□□□□□ -1.87
SORT1-202ENST00000466471 CSPG4Q6UVK1 2322 aa3.35□□□□□ -1.87
SORT1-202ENST00000466471 LOC105369274A0A096LPK9 316 aa3.35□□□□□ -1.87
SORT1-202ENST00000466471 LOC102723532A0A0G2JNH3 316 aa3.35□□□□□ -1.87
SORT1-202ENST00000466471 TCRBV7S3A2A0A539 114 aa3.35□□□□□ -1.87
SORT1-202ENST00000466471 LNP1A1A4G5 178 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms