RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 KCNF1Q9H3M0 494 aa8.85□□□□□ -0.99
APP-213ENST00000464867 COG4Q9H9E3 785 aa8.85□□□□□ -0.99
APP-213ENST00000464867 B4GALT7Q9UBV7 327 aa8.85□□□□□ -0.99
APP-213ENST00000464867 C19orf25Q9UFG5 118 aaPredicted RBP8.85□□□□□ -0.99
APP-213ENST00000464867 ASF1AQ9Y294 204 aa8.85□□□□□ -0.99
APP-213ENST00000464867 SPO11Q9Y5K1 396 aa8.85□□□□□ -0.99
APP-213ENST00000464867 FAM169AQ9Y6X4 670 aa8.85□□□□□ -0.99
APP-213ENST00000464867 ZNF407Q9C0G0 2248 aa8.85□□□□□ -0.99
APP-213ENST00000464867 A0A0G2JNJ9 132 aa8.84□□□□□ -0.99
APP-213ENST00000464867 LOC100289279A0A1B0GTE1 492 aa8.84□□□□□ -0.99
APP-213ENST00000464867 TMEM191CA6NGB0 347 aa8.84□□□□□ -0.99
APP-213ENST00000464867 CLDN4O14493 209 aa8.84□□□□□ -0.99
APP-213ENST00000464867 GPR39O43194 453 aa8.84□□□□□ -0.99
APP-213ENST00000464867 MFSD11O43934 449 aa8.84□□□□□ -0.99
APP-213ENST00000464867 HS6ST1O60243 411 aa8.84□□□□□ -0.99
APP-213ENST00000464867 DNAJB6O75190 326 aa8.84□□□□□ -0.99
APP-213ENST00000464867 NEURL1O76050 574 aa8.84□□□□□ -0.99
APP-213ENST00000464867 PDE9AO76083 593 aa8.84□□□□□ -0.99
APP-213ENST00000464867 SEC24DO94855 1032 aaPredicted RBP8.84□□□□□ -0.99
APP-213ENST00000464867 ANXA5P08758 320 aa8.84□□□□□ -0.99
APP-213ENST00000464867 ERVK-10P10266 1014 aa8.84□□□□□ -0.99
APP-213ENST00000464867 TACR1P25103 407 aa8.84□□□□□ -0.99
APP-213ENST00000464867 PRLHRP49683 370 aa8.84□□□□□ -0.99
APP-213ENST00000464867 POLR2FP61218 127 aaKnown RBP8.84□□□□□ -0.99
APP-213ENST00000464867 GXYLT1Q4G148 440 aa8.84□□□□□ -0.99
APP-213ENST00000464867 FKBP15Q5T1M5 1219 aa8.84□□□□□ -0.99
APP-213ENST00000464867 KIAA0930Q6ICG6 404 aaPredicted RBP8.84□□□□□ -0.99
APP-213ENST00000464867 ZNF585AQ6P3V2 769 aa8.84□□□□□ -0.99
APP-213ENST00000464867 TMEM205Q6UW68 189 aa8.84□□□□□ -0.99
APP-213ENST00000464867 TMTC1Q8IUR5 882 aa8.84□□□□□ -0.99
APP-213ENST00000464867 ELOA2Q8IYF1 753 aaPredicted RBP8.84□□□□□ -0.99
APP-213ENST00000464867 TBC1D21Q8IYX1 336 aa8.84□□□□□ -0.99
APP-213ENST00000464867 FLVCR1-AS1Q8TAF5 88 aa8.84□□□□□ -0.99
APP-213ENST00000464867 HEXDCQ8WVB3 486 aa8.84□□□□□ -0.99
APP-213ENST00000464867 ZNF830Q96NB3 372 aaPredicted RBP8.84□□□□□ -0.99
APP-213ENST00000464867 PIP5K1AQ99755 562 aa8.84□□□□□ -0.99
APP-213ENST00000464867 TMPRSS13Q9BYE2 586 aa8.84□□□□□ -0.99
APP-213ENST00000464867 AMBRA1Q9C0C7 1298 aa8.84□□□□□ -0.99
APP-213ENST00000464867 ATG10Q9H0Y0 220 aa8.84□□□□□ -0.99
APP-213ENST00000464867 MKKSQ9NPJ1 570 aaPredicted RBP8.84□□□□□ -0.99
APP-213ENST00000464867 LUC7LQ9NQ29 371 aaKnown RBP8.84□□□□□ -0.99
APP-213ENST00000464867 HACD3Q9P035 362 aa8.84□□□□□ -0.99
APP-213ENST00000464867 Q9UFV3 132 aa8.84□□□□□ -0.99
APP-213ENST00000464867 ZC3H7BQ9UGR2 993 aaKnown RBP8.84□□□□□ -0.99
APP-213ENST00000464867 KLHL20Q9Y2M5 609 aa8.84□□□□□ -0.99
APP-213ENST00000464867 KLF13Q9Y2Y9 288 aaPredicted RBP8.84□□□□□ -0.99
APP-213ENST00000464867 CLCA1A8K7I4 914 aa8.83□□□□□ -1
APP-213ENST00000464867 NPIPA2E9PIF3 369 aa8.83□□□□□ -1
APP-213ENST00000464867 NPIPA3F8WFD2 350 aa8.83□□□□□ -1
APP-213ENST00000464867 EIF2S1P05198 315 aaKnown RBP8.83□□□□□ -1
APP-213ENST00000464867 GLI4P10075 376 aa8.83□□□□□ -1
APP-213ENST00000464867 CYB561P49447 251 aa8.83□□□□□ -1
APP-213ENST00000464867 ST13P50502 369 aaKnown RBP8.83□□□□□ -1
APP-213ENST00000464867 DMTNQ08495 405 aa8.83□□□□□ -1
APP-213ENST00000464867 SF1Q15637 639 aaKnown RBP8.83□□□□□ -1
APP-213ENST00000464867 EXT1Q16394 746 aa8.83□□□□□ -1
APP-213ENST00000464867 EMC4Q5J8M3 183 aa8.83□□□□□ -1
APP-213ENST00000464867 FIGLAQ6QHK4 219 aa8.83□□□□□ -1
APP-213ENST00000464867 CPEB2Q7Z5Q1 589 aaKnown RBP8.83□□□□□ -1
APP-213ENST00000464867 KIF18BQ86Y91 864 aa8.83□□□□□ -1
APP-213ENST00000464867 SLC13A5Q86YT5 568 aaPredicted RBP8.83□□□□□ -1
APP-213ENST00000464867 LIX1LQ8IVB5 337 aa8.83□□□□□ -1
APP-213ENST00000464867 OR5AR1Q8NGP9 310 aa8.83□□□□□ -1
APP-213ENST00000464867 CREB3L4Q8TEY5 395 aa8.83□□□□□ -1
APP-213ENST00000464867 NAT14Q8WUY8 206 aa8.83□□□□□ -1
APP-213ENST00000464867 IMP4Q96G21 291 aaKnown RBP8.83□□□□□ -1
APP-213ENST00000464867 CABS1Q96KC9 395 aa8.83□□□□□ -1
APP-213ENST00000464867 AGPAT1Q99943 283 aa8.83□□□□□ -1
APP-213ENST00000464867 ASB8Q9H765 288 aa8.83□□□□□ -1
APP-213ENST00000464867 PCDH18Q9HCL0 1135 aa8.83□□□□□ -1
APP-213ENST00000464867 KCNK1O00180 336 aa8.82□□□□□ -1
APP-213ENST00000464867 BCKDKO14874 412 aa8.82□□□□□ -1
APP-213ENST00000464867 STX7O15400 261 aaKnown RBP8.82□□□□□ -1
APP-213ENST00000464867 ICMTO60725 284 aa8.82□□□□□ -1
APP-213ENST00000464867 TP53P04637 393 aaPredicted RBP8.82□□□□□ -1
APP-213ENST00000464867 IL1R2P27930 398 aa8.82□□□□□ -1
APP-213ENST00000464867 PDHA2P29803 388 aa8.82□□□□□ -1
APP-213ENST00000464867 RFC3P40938 356 aa8.82□□□□□ -1
APP-213ENST00000464867 SERPINB4P48594 390 aa8.82□□□□□ -1
APP-213ENST00000464867 PAFAH1B3Q15102 231 aaKnown RBP8.82□□□□□ -1
APP-213ENST00000464867 CMPK2Q5EBM0 449 aa8.82□□□□□ -1
APP-213ENST00000464867 FIGNQ5HY92 759 aa8.82□□□□□ -1
APP-213ENST00000464867 CCDC183Q5T5S1 534 aa8.82□□□□□ -1
APP-213ENST00000464867 MFSD4BQ5TF39 518 aa8.82□□□□□ -1
APP-213ENST00000464867 KAZNQ674X7 775 aa8.82□□□□□ -1
APP-213ENST00000464867 HEPHL1Q6MZM0 1159 aa8.82□□□□□ -1
APP-213ENST00000464867 GLT6D1Q7Z4J2 308 aa8.82□□□□□ -1
APP-213ENST00000464867 LGI4Q8N135 537 aa8.82□□□□□ -1
APP-213ENST00000464867 OR5M9Q8NGP3 310 aa8.82□□□□□ -1
APP-213ENST00000464867 M1APQ8TC57 530 aa8.82□□□□□ -1
APP-213ENST00000464867 BLOC1S5Q8TDH9 187 aa8.82□□□□□ -1
APP-213ENST00000464867 RNASE6Q93091 150 aaKnown RBP8.82□□□□□ -1
APP-213ENST00000464867 ZUFSPQ96AP4 578 aa8.82□□□□□ -1
APP-213ENST00000464867 MVB12AQ96EY5 273 aa8.82□□□□□ -1
APP-213ENST00000464867 MMABQ96EY8 250 aaPredicted RBP8.82□□□□□ -1
APP-213ENST00000464867 ZNF285Q96NJ3 590 aa8.82□□□□□ -1
APP-213ENST00000464867 PLCD4Q9BRC7 762 aa8.82□□□□□ -1
APP-213ENST00000464867 TGIF2Q9GZN2 237 aa8.82□□□□□ -1
APP-213ENST00000464867 SLC25A51Q9H1U9 297 aa8.82□□□□□ -1
APP-213ENST00000464867 PNPLA3Q9NST1 481 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms