RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 TOP6BLQ8N6T0 577 aa11.18□□□□□ -0.62
TNRC6A-205ENST00000464539 LINC01465Q8N7H1 131 aa11.18□□□□□ -0.62
TNRC6A-205ENST00000464539 METTL6Q8TCB7 284 aa11.18□□□□□ -0.62
TNRC6A-205ENST00000464539 TRAPPC12Q8WVT3 735 aa11.18□□□□□ -0.62
TNRC6A-205ENST00000464539 BTN2A2Q8WVV5 523 aa11.18□□□□□ -0.62
TNRC6A-205ENST00000464539 EPYCQ99645 322 aa11.18□□□□□ -0.62
TNRC6A-205ENST00000464539 KATNAL1Q9BW62 490 aa11.18□□□□□ -0.62
TNRC6A-205ENST00000464539 MMP28Q9H239 520 aa11.18□□□□□ -0.62
TNRC6A-205ENST00000464539 IKZF5Q9H5V7 419 aa11.18□□□□□ -0.62
TNRC6A-205ENST00000464539 IL23AQ9NPF7 189 aa11.18□□□□□ -0.62
TNRC6A-205ENST00000464539 MAT2BQ9NZL9 334 aa11.18□□□□□ -0.62
TNRC6A-205ENST00000464539 POLHQ9Y253 713 aa11.18□□□□□ -0.62
TNRC6A-205ENST00000464539 SAMHD1Q9Y3Z3 626 aaKnown RBP11.18□□□□□ -0.62
TNRC6A-205ENST00000464539 CMAHPQ9Y471 501 aa11.18□□□□□ -0.62
TNRC6A-205ENST00000464539 TNPO3Q9Y5L0 923 aaKnown RBP11.18□□□□□ -0.62
TNRC6A-205ENST00000464539 AP1M2Q9Y6Q5 423 aa11.18□□□□□ -0.62
TNRC6A-205ENST00000464539 YJEFN3A6XGL0 299 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 SLC28A1O00337 649 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 E2F3O00716 465 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 TFECO14948 347 aaPredicted RBP11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 RGS14O43566 566 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 RHOBTB1O94844 696 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 FGBP02675 491 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 PGRP06401 933 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 TAF6P49848 677 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 ERVPABLB-1P60509 514 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 PURAQ00577 322 aaKnown RBP11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 MAB21L1Q13394 359 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 TSNQ15631 228 aaKnown RBP11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 ZNF79Q15937 498 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 PCSK7Q16549 785 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 BTBD16Q32M84 506 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 SV2CQ496J9 727 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 GLYR1Q49A26 553 aaPredicted RBP11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 RAB41Q5JT25 222 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 OR4F3Q6IEY1 312 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 PAQR9Q6ZVX9 377 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 SPNS2Q8IVW8 549 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 EFHBQ8N7U6 833 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 TP53I13Q8NBR0 393 aaPredicted RBP11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 OR4M1Q8NGD0 313 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 SH3RF2Q8TEC5 729 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 ELMO1Q92556 727 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 UBE2FQ969M7 185 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 TRIM62Q9BVG3 475 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 CLMPQ9H6B4 373 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 RNF167Q9H6Y7 350 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 CNOT2Q9NZN8 540 aaKnown RBP11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 ABCG2Q9UNQ0 655 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 POLR3HQ9Y535 204 aaPredicted RBP11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 SH3D21A4FU49 640 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 PRR33A8MZF0 331 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 TRIM77I1YAP6 450 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 PLD2O14939 933 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 RGS5O15539 181 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 LDB2O43679 373 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 RPP40O75818 363 aaKnown RBP11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 BEST1O76090 585 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 LGI1O95970 557 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 ALAS2P22557 587 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 PTX3P26022 381 aaPredicted RBP11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 ITGA1P56199 1179 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 PCBP2Q15366 365 aaKnown RBP eCLIP11.17□□□□□ -0.622e-10■□□□□ 9.6
TNRC6A-205ENST00000464539 GPR19Q15760 415 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 LY6KQ17RY6 165 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 FAM174BQ3ZCQ3 159 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 RFTN2Q52LD8 501 aaPredicted RBP11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 FAM171A1Q5VUB5 890 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 PAQR3Q6TCH7 311 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 PLET1Q6UQ28 207 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 ALKAL1Q6UXT8 129 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 SERPINA11Q86U17 422 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 ATCAYQ86WG3 371 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 FAM9CQ8IZT9 166 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 DUSP18Q8NEJ0 188 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 ENKURQ8TC29 256 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 UBASH3BQ8TF42 649 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 ZNF419Q96HQ0 510 aaPredicted RBP11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 TBATAQ96M53 351 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 MGLLQ99685 303 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 TINF2Q9BSI4 451 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 BBS2Q9BXC9 721 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 ASPNQ9BXN1 380 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 PRDM8Q9NQV8 689 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 CATSPERZQ9NTU4 200 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 ABCB8Q9NUT2 735 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 WDR70Q9NW82 654 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 PHF11Q9UIL8 331 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 STUB1Q9UNE7 303 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 SNX10Q9Y5X0 201 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 SNX8Q9Y5X2 465 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 MUC6Q6W4X9 2439 aa11.17□□□□□ -0.62
TNRC6A-205ENST00000464539 WDR47O94967 919 aa11.16□□□□□ -0.62
TNRC6A-205ENST00000464539 SLC25A27O95847 323 aa11.16□□□□□ -0.62
TNRC6A-205ENST00000464539 PTHP01270 115 aa11.16□□□□□ -0.62
TNRC6A-205ENST00000464539 ITGB1P05556 798 aa11.16□□□□□ -0.62
TNRC6A-205ENST00000464539 STSP08842 583 aa11.16□□□□□ -0.62
TNRC6A-205ENST00000464539 ZNF865P0CJ78 1059 aaPredicted RBP11.16□□□□□ -0.62
TNRC6A-205ENST00000464539 SLC2A4P14672 509 aa11.16□□□□□ -0.62
TNRC6A-205ENST00000464539 EPHA2P29317 976 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms