RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 ABCB8Q9NUT2 735 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 R4GN57 208 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 MYH14Q7Z406 1995 aaKnown RBP3.68□□□□□ -1.82
CLK1-208ENST00000464454 STK36Q9NRP7 1315 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 KIF26BQ2KJY2 2108 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 SDR42E2A6NKP2 422 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 C2CD4DB7Z1M9 353 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 F8VVB4 439 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 F8VWA3 439 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 SLC33A1O00400 549 aaPredicted RBP3.67□□□□□ -1.82
CLK1-208ENST00000464454 ZNF263O14978 683 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 ST8SIA3O43173 380 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 GNB3P16520 340 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 SFTPDP35247 375 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 MAGEA11P43364 429 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 NPBWR1P48145 328 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 GNB1P62873 340 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 MYL7Q01449 175 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 IL10RBQ08334 325 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 ITGA9Q13797 1035 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 GTDC1Q4AE62 458 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 CCDC158Q5M9N0 1113 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.67□□□□□ -1.82
CLK1-208ENST00000464454 ARHGEF16Q5VV41 709 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 FAM53AQ6NSI3 398 aaPredicted RBP3.67□□□□□ -1.82
CLK1-208ENST00000464454 FUT10Q6P4F1 479 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 BTNL8Q6UX41 500 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 UNC45BQ8IWX7 931 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 ZNF843Q8N446 348 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 NIPA2Q8N8Q9 360 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 OR7A2PQ8NGA2 310 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 OR4C3Q8NH37 302 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 UBLCP1Q8WVY7 318 aaPredicted RBP3.67□□□□□ -1.82
CLK1-208ENST00000464454 METTL21AQ8WXB1 218 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 SUSD6Q92537 303 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 TEKT1Q969V4 418 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 CENPTQ96BT3 561 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 NDNQ99608 321 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 CDCA3Q99618 268 aaPredicted RBP3.67□□□□□ -1.82
CLK1-208ENST00000464454 HNRNPABQ99729 332 aaKnown RBP3.67□□□□□ -1.82
CLK1-208ENST00000464454 RNF121Q9H920 327 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 OR6C2Q9NZP2 312 aa3.67□□□□□ -1.82
CLK1-208ENST00000464454 RUVBL2Q9Y230 463 aaKnown RBP3.67□□□□□ -1.82
CLK1-208ENST00000464454 ARID2Q68CP9 1835 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 C17orf105B2RV13 164 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 KBTBD13C9JR72 458 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 EXTL3O43909 919 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 FMO6PO60774 539 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 TRMUO75648 421 aaKnown RBP3.66□□□□□ -1.82
CLK1-208ENST00000464454 GAS8-AS1O95177 125 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 IGLV1-44P01699 117 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 FAM157CP0CG43 387 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 EEF2P13639 858 aaKnown RBP3.66□□□□□ -1.82
CLK1-208ENST00000464454 ITIH1P19827 911 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 CCND3P30281 292 aaPredicted RBP3.66□□□□□ -1.82
CLK1-208ENST00000464454 ALDH1B1P30837 517 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 SNU13P55769 128 aaKnown RBP3.66□□□□□ -1.82
CLK1-208ENST00000464454 ERVK11-1P61568 191 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 ST8SIA6P61647 398 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 TEAD2Q15562 447 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 SMU1Q2TAY7 513 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 KBTBD12Q3ZCT8 623 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 GPR33Q49SQ1 333 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 SLC25A53Q5H9E4 307 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 GLRA4Q5JXX5 417 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 TTC27Q6P3X3 843 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 ANKRD46Q86W74 232 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 MEX3DQ86XN8 651 aaKnown RBP3.66□□□□□ -1.82
CLK1-208ENST00000464454 CCDC170Q8IYT3 715 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 RCOR2Q8IZ40 523 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 SYCP3Q8IZU3 236 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 CLYBLQ8N0X4 340 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 ADAD2Q8NCV1 583 aaKnown RBP3.66□□□□□ -1.82
CLK1-208ENST00000464454 DBF4BQ8NFT6 615 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 HCAR2Q8TDS4 363 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 PIK3R3Q92569 461 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 DYRK2Q92630 601 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 C4orf45Q96LM5 186 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 C10orf88Q9H8K7 445 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 TMEM161AQ9NX61 479 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 SLCO1C1Q9NYB5 712 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 FBXL5Q9UKA1 691 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 GMEB2Q9UKD1 530 aa3.66□□□□□ -1.82
CLK1-208ENST00000464454 PA2G4Q9UQ80 394 aaKnown RBP3.66□□□□□ -1.82
CLK1-208ENST00000464454 TRAV18A0A075B6X5 111 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 TRBV5-5A0A0J9YX44 114 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 ILVBLA1L0T0 632 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 PRSS46E5RG02 174 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 NPIPA3F8WFD2 350 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 RAD51DO75771 328 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 KRT33AO76009 404 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 AP2A2O94973 939 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 NADKO95544 446 aaPredicted RBP3.65□□□□□ -1.83
CLK1-208ENST00000464454 GPIP06744 558 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 CD48P09326 243 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 F3P13726 295 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 OAS2P29728 719 aaKnown RBP3.65□□□□□ -1.83
CLK1-208ENST00000464454 SSTR1P30872 391 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 MAP2K2P36507 400 aa3.65□□□□□ -1.83
CLK1-208ENST00000464454 FRKP42685 505 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms