RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 CRLF3Q8IUI8 442 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 SIAH3Q8IW03 269 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 SLC5A8Q8N695 610 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.67□□□□□ -0.22
SMC1A-204ENST00000463684 M1APQ8TC57 530 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 MCOLN3Q8TDD5 553 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 ASB5Q8WWX0 329 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 SMPDL3AQ92484 453 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 OR2A5Q96R48 311 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 ZNF559Q9BR84 538 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 TMEM121Q9BTD3 319 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 TNFRSF10DQ9UBN6 386 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 GNPTGQ9UJJ9 305 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 RUVBL2Q9Y230 463 aaKnown RBP13.67□□□□□ -0.22
SMC1A-204ENST00000463684 SYCE3A1L190 88 aa13.66□□□□□ -0.22
SMC1A-204ENST00000463684 GOLGA6L9A6NEM1 432 aa13.66□□□□□ -0.22
SMC1A-204ENST00000463684 GABRR3A8MPY1 467 aa13.66□□□□□ -0.22
SMC1A-204ENST00000463684 EZRP15311 586 aaKnown RBP13.66□□□□□ -0.22
SMC1A-204ENST00000463684 ZNF24P17028 368 aa13.66□□□□□ -0.22
SMC1A-204ENST00000463684 AGTR2P50052 363 aa13.66□□□□□ -0.22
SMC1A-204ENST00000463684 EFNA3P52797 238 aa13.66□□□□□ -0.22
SMC1A-204ENST00000463684 RWDD2BP57060 319 aa13.66□□□□□ -0.22
SMC1A-204ENST00000463684 ACTN3Q08043 901 aaPredicted RBP13.66□□□□□ -0.22
SMC1A-204ENST00000463684 PTK6Q13882 451 aa13.66□□□□□ -0.22
SMC1A-204ENST00000463684 ANKRD20A4Q4UJ75 823 aa13.66□□□□□ -0.22
SMC1A-204ENST00000463684 CES4AQ5XG92 561 aa13.66□□□□□ -0.22
SMC1A-204ENST00000463684 TMEM211Q6ICI0 200 aa13.66□□□□□ -0.22
SMC1A-204ENST00000463684 SUSD1Q6UWL2 747 aa13.66□□□□□ -0.22
SMC1A-204ENST00000463684 PPP1R21Q6ZMI0 780 aa13.66□□□□□ -0.22
SMC1A-204ENST00000463684 CEP128Q6ZU80 1094 aa13.66□□□□□ -0.22
SMC1A-204ENST00000463684 LDB1Q86U70 411 aaPredicted RBP13.66□□□□□ -0.22
SMC1A-204ENST00000463684 PAQR7Q86WK9 346 aa13.66□□□□□ -0.22
SMC1A-204ENST00000463684 MMP21Q8N119 569 aa13.66□□□□□ -0.22
SMC1A-204ENST00000463684 CHDHQ8NE62 594 aaPredicted RBP13.66□□□□□ -0.22
SMC1A-204ENST00000463684 CATSPERZQ9NTU4 200 aa13.66□□□□□ -0.22
SMC1A-204ENST00000463684 LRFN1Q9P244 771 aa13.66□□□□□ -0.22
SMC1A-204ENST00000463684 CPAMD8Q8IZJ3 1885 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 A0A0U1RQJ8 604 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 ERI2A8K979 691 aaKnown RBP13.65□□□□□ -0.22
SMC1A-204ENST00000463684 H0YIG0 161 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 CCNDBP1O95273 360 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 TAS2R50P59544 299 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 RELAQ04206 551 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 ACVR1Q04771 509 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 PRDX1Q06830 199 aaKnown RBP13.65□□□□□ -0.22
SMC1A-204ENST00000463684 ADCK2Q7Z695 626 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 ANKRD37Q7Z713 158 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 LRRC6Q86X45 466 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 ARHGEF39Q8N4T4 335 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 OR9A1PQ8NGU1 263 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 OR9A4Q8NGU2 314 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 OR51Q1Q8NH59 317 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 ZNF778Q96MU6 729 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 MMP25Q9NPA2 562 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 KCNJ16Q9NPI9 418 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 PCYOX1Q9UHG3 505 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 ASB1Q9Y576 335 aa13.65□□□□□ -0.22
SMC1A-204ENST00000463684 NIPBLQ6KC79 2804 aaeCLIP13.65□□□□□ -0.22
SMC1A-204ENST00000463684 IGKV1-8A0A0C4DH67 115 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 ZNF839A8K0R7 811 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 CDK2AP1O14519 115 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 CD3EAPO15446 510 aaKnown RBP13.64□□□□□ -0.23
SMC1A-204ENST00000463684 NDUFS3O75489 264 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 FAM155BO75949 473 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 NEURL1O76050 574 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 TPOP07202 933 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 IGFBP2P18065 325 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 CHRNB4P30926 498 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 DNAJA1P31689 397 aaKnown RBP13.64□□□□□ -0.23
SMC1A-204ENST00000463684 PTGS2P35354 604 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 HSD17B2P37059 387 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 IST1P53990 364 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 PPP2R2AP63151 447 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 ICE2Q659A1 982 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 ZNF425Q6IV72 752 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 AADACL2Q6P093 401 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 TGIF2LYQ8IUE0 185 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 CNGA4Q8IV77 575 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 CHERPQ8IWX8 916 aaKnown RBP13.64□□□□□ -0.23
SMC1A-204ENST00000463684 LILRB4Q8NHJ6 448 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 FAM57AQ8TBR7 257 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 PEX13Q92968 403 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 NPAS2Q99743 824 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 OLFM1Q99784 485 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 EBNA1BP2Q99848 306 aaKnown RBP13.64□□□□□ -0.23
SMC1A-204ENST00000463684 P2RY12Q9H244 342 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 CDCP1Q9H5V8 836 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 SYNPO2LQ9H987 977 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 SLC24A3Q9HC58 644 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 TAC3Q9UHF0 121 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 TSR3Q9UJK0 312 aaKnown RBP13.64□□□□□ -0.23
SMC1A-204ENST00000463684 R3HDM2Q9Y2K5 976 aaKnown RBP13.64□□□□□ -0.23
SMC1A-204ENST00000463684 PCDHA13Q9Y5I0 950 aa13.64□□□□□ -0.23
SMC1A-204ENST00000463684 PCNX1Q96RV3 2341 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 NKX2-6A6NCS4 301 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 USP27XA6NNY8 438 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 E7EVH7 732 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 NDC80O14777 642 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 MAN1A2O60476 641 aa13.63□□□□□ -0.23
SMC1A-204ENST00000463684 SLC25A12O75746 678 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms