RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 ZNF41P51814 821 aaPredicted RBP12.45□□□□□ -0.42
NUP58-206ENST00000463407 ADARP55265 1226 aaKnown RBP12.45□□□□□ -0.42
NUP58-206ENST00000463407 PER3P56645 1201 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 PPP2R2BQ00005 443 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 FAM214AQ32MH5 1076 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 ZC3H14Q6PJT7 736 aaKnown RBP12.45□□□□□ -0.42
NUP58-206ENST00000463407 RASSF6Q6ZTQ3 369 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 IKBIPQ70UQ0 350 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 CROCCP3Q8IVE0 287 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 TMEM130Q8N3G9 435 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 C2CD4AQ8NCU7 369 aaPredicted RBP12.45□□□□□ -0.42
NUP58-206ENST00000463407 FAR1Q8WVX9 515 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 PRAP1Q96NZ9 151 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 FARSBQ9NSD9 589 aaKnown RBP12.45□□□□□ -0.42
NUP58-206ENST00000463407 HCFC1R1Q9NWW0 138 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 UBE2QL1A1L167 161 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 PRAMEF12O95522 483 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 BCHEP06276 602 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 LMO3Q8TAP4 145 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 PHOSPHO1Q8TCT1 267 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 OR8D2Q9GZM6 311 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 SLCO3A1Q9UIG8 710 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 ZDHHC2Q9UIJ5 367 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 OR1I1O60431 355 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 SHOX2O60902 331 aaPredicted RBP12.45□□□□□ -0.42
NUP58-206ENST00000463407 IL33O95760 270 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 CD70P32970 193 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 PITX1P78337 314 aaPredicted RBP12.45□□□□□ -0.42
NUP58-206ENST00000463407 RIPK1Q13546 671 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 KCNC3Q14003 757 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 KIAA1161Q6NSJ0 714 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 PRTFDC1Q9NRG1 225 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 LYARQ9NX58 379 aaKnown RBP12.45□□□□□ -0.42
NUP58-206ENST00000463407 COMMD9Q9P000 198 aa12.45□□□□□ -0.42
NUP58-206ENST00000463407 VSTM5A8MXK1 200 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 K7ERQ8 282 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 CDC123O75794 336 aaPredicted RBP12.44□□□□□ -0.42
NUP58-206ENST00000463407 ITGB1P05556 798 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 C6P13671 934 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 RNASE12Q5GAN4 147 aaKnown RBP12.44□□□□□ -0.42
NUP58-206ENST00000463407 OR10H4Q8NGA5 316 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 GPR22Q99680 433 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 TMEM233B4DJY2 109 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 PRODHO43272 600 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 DLX3O60479 287 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 GLDCP23378 1020 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 LIN54Q6MZP7 749 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 NIPAL1Q6NVV3 410 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 TTC9BQ8N6N2 239 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 C10orf82Q8WW14 230 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 MOCS1Q9NZB8 636 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 PCDHGA2Q9Y5H1 932 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 IRAK3Q9Y616 596 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 SSNA1O43805 119 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 CYP27C1Q4G0S4 372 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 KCTD21Q4G0X4 260 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 USP53Q70EK8 1073 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 CHST4Q8NCG5 386 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 TRPV1Q8NER1 839 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 OR6K6Q8NGW6 343 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 CADM1Q9BY67 442 aaKnown RBP12.44□□□□□ -0.42
NUP58-206ENST00000463407 ZNF487B1APH4 448 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 DRD1P21728 446 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 HNRNPKP61978 463 aaKnown RBP eCLIP12.44□□□□□ -0.42
NUP58-206ENST00000463407 TMEM198Q66K66 360 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 C17orf62Q9BQA9 187 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 ACTL8Q9H568 366 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 TMEM59LQ9UK28 342 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 HAT1O14929 419 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 NOBOXO60393 691 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 ARSAP15289 507 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 MATN1P21941 496 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 ZNF267Q14586 743 aaPredicted RBP12.44□□□□□ -0.42
NUP58-206ENST00000463407 ZBED3Q96IU2 234 aaPredicted RBP12.44□□□□□ -0.42
NUP58-206ENST00000463407 TVP23BQ9NYZ1 205 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 TMED5Q9Y3A6 229 aa12.44□□□□□ -0.42
NUP58-206ENST00000463407 MYH1P12882 1939 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 WASHC1A8K0Z3 465 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 WASH3PC4AMC7 463 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 M0QZQ0 153 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 EPOP01588 193 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 DUOXA1Q1HG43 343 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 FBXO43Q4G163 708 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 WASH2PQ6VEQ5 465 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 LNX2Q8N448 690 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 NAT14Q8WUY8 206 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 S100ZQ8WXG8 99 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 TSGA13Q96PP4 275 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 FBRSQ9HAH7 460 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 TMLHEQ9NVH6 421 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 GIN1Q9NXP7 522 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 ZNF860A6NHJ4 632 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 GLOD5A6NK44 160 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 NPIPA5E9PKD4 350 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 CLIC1O00299 241 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 CPNE3O75131 537 aaKnown RBP12.43□□□□□ -0.42
NUP58-206ENST00000463407 ANGPTL1O95841 491 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 RAP2AP10114 183 aa12.43□□□□□ -0.42
NUP58-206ENST00000463407 MTHFD1P11586 935 aaKnown RBP12.43□□□□□ -0.42
NUP58-206ENST00000463407 PSMD7P51665 324 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms