RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 ZNF500O60304 480 aaPredicted RBP12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 FAM155BO75949 473 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 ACSL3O95573 720 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 S100BP04271 92 aaPredicted RBP12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 INHBAP08476 426 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 CDH1P12830 882 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 TNFRSF8P28908 595 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 FOLR3P41439 243 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 SLC6A12P48065 614 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 PMS2P54278 862 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 CYP4F2P78329 520 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 SSPNQ14714 243 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 TGFBIQ15582 683 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 C1orf189Q5VU69 101 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 THOC6Q86W42 341 aaKnown RBP12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 MFSD9Q8NBP5 474 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 PDPRQ8NCN5 879 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 OR2Y1Q8NGV0 311 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 ADAMTS17Q8TE56 1095 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 SLC5A11Q8WWX8 675 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 EXTL1Q92935 676 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 RNF31Q96EP0 1072 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 CABS1Q96KC9 395 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 NUDT4Q9NZJ9 180 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 FETUBQ9UGM5 382 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 TLK1Q9UKI8 766 aa12.46□□□□□ -0.41
R3HDM1-213ENST00000463230 KRT38O76015 456 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 ITGAXP20702 1163 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 ALAS2P22557 587 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 GSTM2P28161 218 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 ERV3-1Q14264 604 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 CSHL1Q14406 222 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 FAM83EQ2M2I3 478 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 ZXDCQ2QGD7 858 aaPredicted RBP12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 DEFB109BQ30KR1 87 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 NIPAL1Q6NVV3 410 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 ARHGEF39Q8N4T4 335 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 RHEBL1Q8TAI7 183 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 SEC16BQ96JE7 1060 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 VPS50Q96JG6 964 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 C10orf90Q96M02 699 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 BBC3Q96PG8 261 aaPredicted RBP12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 OR4K3Q96R72 315 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 RUFY1Q96T51 708 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 ABCF3Q9NUQ8 709 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 MAN2B2Q9Y2E5 1009 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 KCNMB2Q9Y691 235 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 IGSF10Q6WRI0 2623 aa12.46□□□□□ -0.42
R3HDM1-213ENST00000463230 SYCE1LA8MT33 242 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 PCDH17O14917 1159 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 NRP2O60462 931 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 KERAO60938 352 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 KLF7O75840 302 aaPredicted RBP12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 EIF2S1P05198 315 aaKnown RBP12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 RHOXF2BP0C7M4 288 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 CXCR2P25025 360 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 AHRP35869 848 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 REEP5Q00765 189 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 LGSNQ5TDP6 509 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 ALKBH8Q96BT7 664 aaKnown RBP12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 PTERQ96BW5 349 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 TM4SF19Q96DZ7 209 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 PAFAH2Q99487 392 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 AIF1LQ9BQI0 150 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 RHOXF2Q9BQY4 288 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 ZNF304Q9HCX3 659 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 SNX15Q9NRS6 342 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 SLC22A11Q9NSA0 550 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 RNF112Q9ULX5 631 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 RUVBL1Q9Y265 456 aaKnown RBP12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 IGLV3-12A0A075B6K2 115 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 C2orf72A6NCS6 295 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 CYC1P08574 325 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 GNAZP19086 355 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 MSH2P43246 934 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 MAGEA12P43365 314 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 RRADP55042 308 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 POLE2P56282 527 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 RPS18P62269 152 aaKnown RBP12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 KCNAB2Q13303 367 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 PWP1Q13610 501 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 IL10RAQ13651 578 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 OR4D1Q15615 310 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 MROH9Q5TGP6 573 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 MLIPQ5VWP3 458 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 KLC3Q6P597 504 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 COX15Q7KZN9 410 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 CMC1Q7Z7K0 106 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 ASPGQ86U10 573 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 UBTD2Q8WUN7 234 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 TXLNGYQ9BZA5 131 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 EHD1Q9H4M9 534 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 IGSF5Q9NSI5 407 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 STARD5Q9NSY2 213 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 C14orf105Q9NVL8 296 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 WWOXQ9NZC7 414 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 TMCO1Q9UM00 188 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 SH2B3Q9UQQ2 575 aa12.45□□□□□ -0.42
R3HDM1-213ENST00000463230 HMX2A2RU54 273 aa12.44□□□□□ -0.42
R3HDM1-213ENST00000463230 VSTM2BA6NLU5 285 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms