RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 GMPRP36959 345 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 CRISP3P54108 245 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 INHBCP55103 352 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 SKP1P63208 163 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 KEAP1Q14145 624 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 VMACQ2NL98 169 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 RPTNQ6XPR3 784 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 OR7G1Q8NGA0 311 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 OR6K2Q8NGY2 324 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 TMEM125Q96AQ2 219 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 SLC35G5Q96KT7 338 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 MTERF1Q99551 399 aaKnown RBP15.37■□□□□ 0.05
SMC4-204ENST00000462787 ABCB8Q9NUT2 735 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 DNAJC27Q9NZQ0 273 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 CPA4Q9UI42 421 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 CYTH4Q9UIA0 394 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 STUB1Q9UNE7 303 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 SLC27A5Q9Y2P5 690 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 MED1Q15648 1581 aaPredicted RBP15.37■□□□□ 0.05
SMC4-204ENST00000462787 A0A1B0GVM2 712 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 PCDH8O95206 1070 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 CRHBPP24387 322 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 PROX2Q3B8N5 592 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 KIAA1161Q6NSJ0 714 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 RTL4Q6ZR62 310 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 PKP4Q99569 1192 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 TRIM36Q9NQ86 728 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 TLR6Q9Y2C9 796 aa15.37■□□□□ 0.05
SMC4-204ENST00000462787 HAS3O00219 553 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 TEX28O15482 410 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 RP2O75695 350 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 KHKP50053 298 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 RAB2AP61019 212 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 PLCZ1Q86YW0 608 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 PPIL3Q9H2H8 161 aaKnown RBP15.36■□□□□ 0.05
SMC4-204ENST00000462787 HEMK1Q9Y5R4 338 aaPredicted RBP15.36■□□□□ 0.05
SMC4-204ENST00000462787 ZCWPW2A0A1B0GU75 182 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 ARL6IP5O75915 188 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 PRKAR2AP13861 404 aaKnown RBP15.36■□□□□ 0.05
SMC4-204ENST00000462787 KDELR2P33947 212 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 RYKP34925 604 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 SMAD3P84022 425 aaKnown RBP15.36■□□□□ 0.05
SMC4-204ENST00000462787 DSG2Q14126 1118 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 RAET1GQ6H3X3 334 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 ENPP6Q6UWR7 440 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 LBX2Q6XYB7 198 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 FRRS1Q6ZNA5 592 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 OR4C6Q8NH72 309 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 ZBED6CLQ96FA7 236 aaPredicted RBP15.36■□□□□ 0.05
SMC4-204ENST00000462787 NSUN5Q96P11 429 aaKnown RBP15.36■□□□□ 0.05
SMC4-204ENST00000462787 TSSK6Q9BXA6 273 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 ACTR6Q9GZN1 396 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 CCSER2Q9H7U1 834 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 RNF121Q9H920 327 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 PCDH10Q9P2E7 1040 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 HCN1O60741 890 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 ZNF26P17031 533 aaPredicted RBP15.36■□□□□ 0.05
SMC4-204ENST00000462787 SPCS2Q15005 226 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 GDPGP1Q6ZNW5 385 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 HFE2Q6ZVN8 426 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 LILRA2Q8N149 483 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 C1orf216Q8TAB5 229 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 ASB12Q8WXK4 309 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 ING5Q8WYH8 240 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 KIAA1522Q9P206 1035 aaPredicted RBP15.36■□□□□ 0.05
SMC4-204ENST00000462787 EXTL2Q9UBQ6 330 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 EVLQ9UI08 416 aaPredicted RBP15.36■□□□□ 0.05
SMC4-204ENST00000462787 ARFGEF2Q9Y6D5 1785 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 TPST2O60704 377 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 WEE1P30291 646 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 SPHARQ15513 63 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 FAM117BQ6P1L5 589 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 TNFAIP8L2Q6P589 184 aaPredicted RBP15.36■□□□□ 0.05
SMC4-204ENST00000462787 ZNF598Q86UK7 904 aaKnown RBP15.36■□□□□ 0.05
SMC4-204ENST00000462787 RANBP3LQ86VV4 465 aaPredicted RBP15.36■□□□□ 0.05
SMC4-204ENST00000462787 ASB15Q8WXK1 588 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 SCRN2Q96FV2 425 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 SPATA9Q9BWV2 254 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 TCF7L1Q9HCS4 588 aa15.36■□□□□ 0.05
SMC4-204ENST00000462787 TRAV6A0A075B6T7 132 aa15.35■□□□□ 0.05
SMC4-204ENST00000462787 ABHD14A-ACY1A0A1B0GW23 586 aa15.35■□□□□ 0.05
SMC4-204ENST00000462787 URADA6NGE7 173 aa15.35■□□□□ 0.05
SMC4-204ENST00000462787 GLUD1P00367 558 aa15.35■□□□□ 0.05
SMC4-204ENST00000462787 PCSK6P29122 969 aa15.35■□□□□ 0.05
SMC4-204ENST00000462787 ARCN1P48444 511 aaKnown RBP15.35■□□□□ 0.05
SMC4-204ENST00000462787 DGKGP49619 791 aa15.35■□□□□ 0.05
SMC4-204ENST00000462787 GBX2P52951 348 aaPredicted RBP15.35■□□□□ 0.05
SMC4-204ENST00000462787 PSMA6P60900 246 aaKnown RBP15.35■□□□□ 0.05
SMC4-204ENST00000462787 HSPB3Q12988 150 aa15.35■□□□□ 0.05
SMC4-204ENST00000462787 OR13F1Q8NGS4 319 aa15.35■□□□□ 0.05
SMC4-204ENST00000462787 KCNJ9Q92806 393 aa15.35■□□□□ 0.05
SMC4-204ENST00000462787 PCDHGA4Q9Y5G9 962 aa15.35■□□□□ 0.05
SMC4-204ENST00000462787 ALG5Q9Y673 324 aa15.35■□□□□ 0.05
SMC4-204ENST00000462787 PRMT3O60678 531 aa15.35■□□□□ 0.05
SMC4-204ENST00000462787 VIPP01282 170 aa15.35■□□□□ 0.05
SMC4-204ENST00000462787 DCTP40126 519 aa15.35■□□□□ 0.05
SMC4-204ENST00000462787 NOVP48745 357 aa15.35■□□□□ 0.05
SMC4-204ENST00000462787 AP2S1P53680 142 aaPredicted RBP15.35■□□□□ 0.05
SMC4-204ENST00000462787 AP1S2P56377 157 aa15.35■□□□□ 0.05
SMC4-204ENST00000462787 CXCR4P61073 352 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms