RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 ASNA1O43681 348 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 MATN4O95460 622 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 NUDT7P0C024 238 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 PKMP14618 531 aaKnown RBP10.25□□□□□ -0.77
CBX3-205ENST00000462165 CD46P15529 392 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 ABOP16442 354 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 RPS3P23396 243 aaKnown RBP eCLIP10.25□□□□□ -0.77
CBX3-205ENST00000462165 EEF1DP29692 281 aaKnown RBP10.25□□□□□ -0.77
CBX3-205ENST00000462165 CD96P40200 585 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 MAT1AQ00266 395 aaKnown RBP10.25□□□□□ -0.77
CBX3-205ENST00000462165 RELAQ04206 551 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 TBX2Q13207 712 aaPredicted RBP10.25□□□□□ -0.77
CBX3-205ENST00000462165 GBX1Q14549 363 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 OR1C1Q15619 314 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 MEP1AQ16819 746 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 FCRLBQ6BAA4 426 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 ZNF425Q6IV72 752 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 SUSD1Q6UWL2 747 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 LANCL3Q6ZV70 420 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 LRRC6Q86X45 466 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 CRLF3Q8IUI8 442 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 CHERPQ8IWX8 916 aaKnown RBP10.25□□□□□ -0.77
CBX3-205ENST00000462165 GHDCQ8N2G8 530 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 TAB3Q8N5C8 712 aaPredicted RBP10.25□□□□□ -0.77
CBX3-205ENST00000462165 OR9A1PQ8NGU1 263 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 SLC35B2Q8TB61 432 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 M1APQ8TC57 530 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 AGAP11Q8TF27 550 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 CA5BP1Q8WTZ4 195 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 SMPDL3AQ92484 453 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 RERGQ96A58 199 aaPredicted RBP10.25□□□□□ -0.77
CBX3-205ENST00000462165 DMRTA2Q96SC8 542 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 NPAS2Q99743 824 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 VKORC1Q9BQB6 163 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 UTP23Q9BRU9 249 aaKnown RBP10.25□□□□□ -0.77
CBX3-205ENST00000462165 TRIM51Q9BSJ1 452 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 TMEM121Q9BTD3 319 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 VN1R1Q9GZP7 353 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 KCNK13Q9HB14 408 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 KLHL1Q9NR64 748 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 CATSPERZQ9NTU4 200 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 UTP6Q9NYH9 597 aaKnown RBP10.25□□□□□ -0.77
CBX3-205ENST00000462165 MARCH4Q9P2E8 410 aaPredicted RBP10.25□□□□□ -0.77
CBX3-205ENST00000462165 C19orf25Q9UFG5 118 aaPredicted RBP10.25□□□□□ -0.77
CBX3-205ENST00000462165 NPIPA1Q9UND3 350 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 H0YIG0 161 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 CDK2AP1O14519 115 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 ADAM10O14672 748 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 P2RX6O15547 441 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 DIAPH2O60879 1101 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 CCNDBP1O95273 360 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 TSPAN12O95859 305 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 EZRP15311 586 aaKnown RBP10.24□□□□□ -0.77
CBX3-205ENST00000462165 IGFBP2P18065 325 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 ATP5DP30049 168 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 RPA3P35244 121 aaPredicted RBP10.24□□□□□ -0.77
CBX3-205ENST00000462165 FDFT1P37268 417 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 GRIA1P42261 906 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 AVPR1BP47901 424 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 PRDX1Q06830 199 aaKnown RBP10.24□□□□□ -0.77
CBX3-205ENST00000462165 KLF1Q13351 362 aaPredicted RBP10.24□□□□□ -0.77
CBX3-205ENST00000462165 ARHGAP19Q14CB8 494 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 SPA17Q15506 151 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 EXT1Q16394 746 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 NDUFA9Q16795 377 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 ANKRD20A4Q4UJ75 823 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.24□□□□□ -0.77
CBX3-205ENST00000462165 ICE2Q659A1 982 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 SLC25A25Q6KCM7 469 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 PPP1R21Q6ZMI0 780 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 GALNTL5Q7Z4T8 443 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 DOLPP1Q86YN1 238 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 CCDC170Q8IYT3 715 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 EID3Q8N140 333 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 FAM98AQ8NCA5 519 aaKnown RBP10.24□□□□□ -0.77
CBX3-205ENST00000462165 SDCCAG3Q96C92 435 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 ETNK1Q9HBU6 452 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 MMP25Q9NPA2 562 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 ANKRD10Q9NXR5 420 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 COQ3Q9NZJ6 369 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 TAC3Q9UHF0 121 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 PCYOX1Q9UHG3 505 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 ASB1Q9Y576 335 aa10.24□□□□□ -0.77
CBX3-205ENST00000462165 INTS1Q8N201 2190 aaKnown RBP10.24□□□□□ -0.77
CBX3-205ENST00000462165 NAV3Q8IVL0 2385 aa10.23□□□□□ -0.77
CBX3-205ENST00000462165 SOWAHDA6NJG2 315 aa10.23□□□□□ -0.77
CBX3-205ENST00000462165 ARHGEF33A8MVX0 844 aa10.23□□□□□ -0.77
CBX3-205ENST00000462165 MYO1CO00159 1063 aa10.23□□□□□ -0.77
CBX3-205ENST00000462165 PRRG2O14669 202 aa10.23□□□□□ -0.77
CBX3-205ENST00000462165 ZNHIT1O43257 154 aa10.23□□□□□ -0.77
CBX3-205ENST00000462165 NDUFS3O75489 264 aa10.23□□□□□ -0.77
CBX3-205ENST00000462165 NEURL1O76050 574 aa10.23□□□□□ -0.77
CBX3-205ENST00000462165 NSA2O95478 260 aaKnown RBP10.23□□□□□ -0.77
CBX3-205ENST00000462165 PTMAP06454 111 aaKnown RBP10.23□□□□□ -0.77
CBX3-205ENST00000462165 SP1P08047 785 aa10.23□□□□□ -0.77
CBX3-205ENST00000462165 STIP1P31948 543 aaKnown RBP10.23□□□□□ -0.77
CBX3-205ENST00000462165 AGTR2P50052 363 aa10.23□□□□□ -0.77
CBX3-205ENST00000462165 SNRPNP63162 240 aaKnown RBP10.23□□□□□ -0.77
CBX3-205ENST00000462165 MINDY4Q4G0A6 757 aa10.23□□□□□ -0.77
CBX3-205ENST00000462165 CTSL3PQ5NE16 218 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms