RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 DHRS4L1P0CG22 281 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 PRSS56P0CW18 603 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 TPSB2P20231 275 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 APOBEC3AP31941 199 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 ACTN2P35609 894 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 PTDSS1P48651 473 aaKnown RBP7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 THOP1P52888 689 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 CRADDP78560 199 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 BASP1P80723 227 aaKnown RBP7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 ZNF844Q08AG5 666 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 CDH17Q12864 832 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 PTK6Q13882 451 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 POU6F1Q14863 301 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 TPSAB1Q15661 275 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 INSCQ1MX18 579 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 RNASEH2BQ5TBB1 312 aaKnown RBP7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 JMJD6Q6NYC1 403 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 FAM151BQ6UXP7 276 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 C4orf22Q6V702 233 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 KCTD20Q7Z5Y7 419 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 ADGRG6Q86SQ4 1221 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 NRROSQ86YC3 692 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 NAXDQ8IW45 347 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 SFTPA2Q8IWL1 248 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 TRAM1L1Q8N609 369 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 NAT8LQ8N9F0 302 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 ZNF548Q8NEK5 533 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 DEFB124Q8NES8 71 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 SPATA4Q8NEY3 305 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 OR56A1Q8NGH5 318 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 OR56A4Q8NGH8 313 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 OR13J1Q8NGT2 312 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 DTX3LQ8TDB6 740 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 NAT14Q8WUY8 206 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 HIC2Q96JB3 615 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 DNAJC1Q96KC8 554 aaKnown RBP7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 PLEKHG4BQ96PX9 1271 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 MNTQ99583 582 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 TRIM51Q9BSJ1 452 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 RTKNQ9BST9 563 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 LRRC61Q9BV99 259 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 SSBP3Q9BWW4 388 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 SORBS1Q9BX66 1292 aaKnown RBP7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 SPATA16Q9BXB7 569 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 REXO4Q9GZR2 422 aaKnown RBP7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 SUDS3Q9H7L9 328 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 RNF14Q9UBS8 474 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 KLQ9UEF7 1012 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 SUFUQ9UMX1 484 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 U3KQA8 63 aa7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 TDRD6O60522 2096 aaKnown RBP7.85□□□□□ -1.15
ECHDC1-212ENST00000461239 GOLGA6L10A0A0M3HER8 536 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 OR51F1A6NGY5 319 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 H7C0S8 307 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 CACNB4O00305 520 aaPredicted RBP7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 PIP5K1BO14986 540 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 CASC3O15234 703 aaKnown RBP7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 STX7O15400 261 aaKnown RBP7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 TTI1O43156 1089 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 AQP9O43315 295 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 TNFRSF6BO95407 300 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 IVLP07476 585 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 ZNF8P17098 575 aaPredicted RBP7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 SPAM1P38567 509 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 PAFAH1B1P43034 410 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 MAGEA3P43357 314 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 ARRB1P49407 418 aaPredicted RBP7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 HNRNPKP61978 463 aaKnown RBP eCLIP7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 B4GALNT1Q00973 533 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 PPARDQ03181 441 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 ACVR1Q04771 509 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 C2orf54Q08AI8 447 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 PYCR3Q53H96 274 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 TMTC4Q5T4D3 741 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 LRRC8BQ6P9F7 803 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 DOK6Q6PKX4 331 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 Q6ZRM9 215 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 RD3Q7Z3Z2 195 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 LINC00523Q86TU6 105 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 ZNF547Q8IVP9 402 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 PIANPQ8IYJ0 282 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 Q8NA96 180 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 STT3BQ8TCJ2 826 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 GLYATL1Q969I3 302 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 CDKN2AIPNLQ96HQ2 116 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 TBATAQ96M53 351 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 KCNC2Q96PR1 638 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 VPS35Q96QK1 796 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 RANBP9Q96S59 729 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 KRT12Q99456 494 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 ZSCAN5AQ9BUG6 496 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 PCDHAC1Q9H158 963 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 CHRAC1Q9NRG0 131 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 PHPT1Q9NRX4 125 aaPredicted RBP7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 NLE1Q9NVX2 485 aaPredicted RBP7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 ATXN10Q9UBB4 475 aa7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 APOBEC3BQ9UH17 382 aaKnown RBP7.84□□□□□ -1.15
ECHDC1-212ENST00000461239 PLXNB3Q9ULL4 1909 aa7.84□□□□□ -1.16
ECHDC1-212ENST00000461239 ZNF106Q9H2Y7 1883 aaKnown RBP7.83□□□□□ -1.16
ECHDC1-212ENST00000461239 NCOR2Q9Y618 2525 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms