RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 RIBC2Q9H4K1 309 aa14.94□□□□□ -0.02
LMNB1-203ENST00000460265 CRNNQ9UBG3 495 aaPredicted RBP14.94□□□□□ -0.02
LMNB1-203ENST00000460265 PCDHGA8Q9Y5G5 932 aa14.94□□□□□ -0.02
LMNB1-203ENST00000460265 PCDHA9Q9Y5H5 950 aa14.94□□□□□ -0.02
LMNB1-203ENST00000460265 ZFC3H1O60293 1989 aaKnown RBP14.94□□□□□ -0.02
LMNB1-203ENST00000460265 H3BM21 787 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 H7C0S8 307 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 DYRK3O43781 588 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 CXCL10P02778 98 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 EBLN1P0CF75 366 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 PRKCAP17252 672 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 ITIH1P19827 911 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 SERPINB10P48595 397 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 DGKGP49619 791 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 KRT33BQ14525 404 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 FAM180BQ6P0A1 224 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 ZNF773Q6PK81 442 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 HORMAD1Q86X24 394 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 GATAD2AQ86YP4 633 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 OR7A2PQ8NGA2 310 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 INPP5KQ9BT40 448 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 CD320Q9NPF0 282 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 CXXC1Q9P0U4 656 aaPredicted RBP14.93□□□□□ -0.02
LMNB1-203ENST00000460265 CASP8AP2Q9UKL3 1982 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 NINQ8N4C6 2090 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 HOXC11O43248 304 aaPredicted RBP14.93□□□□□ -0.02
LMNB1-203ENST00000460265 TMCC2O75069 709 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 ALDH9A1P49189 494 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 PLA2G16P53816 162 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 ASTLQ6HA08 431 aaPredicted RBP14.93□□□□□ -0.02
LMNB1-203ENST00000460265 NATD1Q8N6N6 113 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 ATG16L2Q8NAA4 619 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 VPS37AQ8NEZ2 397 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 SPPL2AQ8TCT8 520 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 FUNDC2Q9BWH2 189 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 RETREG1Q9H6L5 497 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 SNX8Q9Y5X2 465 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 SNX5Q9Y5X3 404 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 WASH3PC4AMC7 463 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 NRG2O14511 850 aaPredicted RBP14.93□□□□□ -0.02
LMNB1-203ENST00000460265 FTH1P02794 183 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 UBL4AP11441 157 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 MAPK1P28482 360 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 FRG2Q64ET8 278 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 PACRGLQ8N7B6 248 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.93□□□□□ -0.02
LMNB1-203ENST00000460265 MAGED4Q96JG8 741 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 FRG2BQ96QU4 278 aa14.93□□□□□ -0.02
LMNB1-203ENST00000460265 MYLKQ15746 1914 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 C16orf96A6NNT2 1141 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 CYP4F2P78329 520 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 LCN8Q6JVE9 175 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 EID3Q8N140 333 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 MUS81Q96NY9 551 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 MIR1-1HGQ9H1L0 117 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 UGT2A1Q9Y4X1 527 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 LOC105371267A0A1B0GV96 52 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 ASPDHA6ND91 283 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 TMEM202A6NGA9 273 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 FPGTO14772 594 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 RGS13O14921 159 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 TSPAN9O75954 239 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 IL6P05231 212 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 RFC2P35250 354 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 CRATP43155 626 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 PRIM2P49643 509 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 RACK1P63244 317 aaKnown RBP14.92□□□□□ -0.02
LMNB1-203ENST00000460265 FAM86B1Q8N7N1 296 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 SMG7Q92540 1137 aaKnown RBP14.92□□□□□ -0.02
LMNB1-203ENST00000460265 CLP1Q92989 425 aaKnown RBP14.92□□□□□ -0.02
LMNB1-203ENST00000460265 ITCHQ96J02 903 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 SEZ6LQ9BYH1 1024 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 ACPTQ9BZG2 426 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 OGDHLQ9ULD0 1010 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 ASF1AQ9Y294 204 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 BPTFQ12830 3046 aa14.92□□□□□ -0.02
LMNB1-203ENST00000460265 EPN2O95208 641 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 TGFB1P01137 390 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 CTSCP53634 463 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 DGUOKQ16854 277 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 HKDC1Q2TB90 917 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 XKR7Q5GH72 579 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 SNAP47Q5SQN1 464 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 PRR23CQ6ZRP0 262 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 ANKRD33Q7Z3H0 272 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 KLK6Q92876 244 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 C11orf49Q9H6J7 331 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 RAPGEFL1Q9UHV5 662 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 INSL6Q9Y581 213 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 PCDHB14Q9Y5E9 798 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 KCNE2Q9Y6J6 123 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 RANBP2P49792 3224 aaKnown RBP14.91□□□□□ -0.02
LMNB1-203ENST00000460265 MMP20O60882 483 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 SEC14L2O76054 403 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 ALX3O95076 343 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 ANXA4P09525 319 aaPredicted RBP14.91□□□□□ -0.02
LMNB1-203ENST00000460265 PIGFQ07326 219 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 AQP6Q13520 282 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 TUBA3CQ13748 450 aa14.91□□□□□ -0.02
LMNB1-203ENST00000460265 IER5LQ5T953 404 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms