RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	TAOK1	Q7L7X3	1001 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	ADCK2	Q7Z695	626 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	ESX1	Q8N693	406 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	ANKRD53	Q8N9V6	530 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	SLC5A11	Q8WWX8	675 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	MOCOS	Q96EN8	888 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	LRFN5	Q96NI6	719 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	CCNL2	Q96S94	520 aa	Predicted RBP	9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	HAUS8	Q9BT25	410 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	SARG	Q9BW04	601 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	AICDA	Q9GZX7	198 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	C12orf65	Q9H3J6	166 aa	Known RBP	9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	WWOX	Q9NZC7	414 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	TMEM216	Q9P0N5	145 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	CROT	Q9UKG9	612 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	RUVBL1	Q9Y265	456 aa	Known RBP	9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	PCDHGA4	Q9Y5G9	962 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	PTPRQ	Q9UMZ3	2332 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	FER1L5	A0AVI2	2057 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	IQANK1	A0A1B0GTG1	560 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	SRPX2	O60687	465 aa	Predicted RBP	9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	STK16	O75716	305 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	SIX3	O95343	332 aa	Predicted RBP	9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	TBX6	O95947	436 aa	Predicted RBP	9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	EIF2S1	P05198	315 aa	Known RBP	9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	PYGB	P11216	843 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	COL6A2	P12110	1019 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	RPS18	P62269	152 aa	Known RBP	9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	CYP4F2	P78329	520 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	SETDB1	Q15047	1291 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	PFKFB4	Q16877	469 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	ATP1A1-AS1	Q5TC04	95 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	TLDC1	Q6P9B6	456 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	CYB5D1	Q6P9G0	228 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	RPS27L	Q71UM5	84 aa	Known RBP	9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	VN1R5	Q7Z5H4	357 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	TMPRSS11B	Q86T26	416 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	GPR135	Q8IZ08	494 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	METTL27	Q8N6F8	245 aa	Predicted RBP	9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	IL22RA1	Q8N6P7	574 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	CSNK1A1L	Q8N752	337 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	N4BP2L2	Q92802	583 aa	Predicted RBP	9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	ZBTB9	Q96C00	473 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	MTBP	Q96DY7	904 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	CLIP3	Q96DZ5	547 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	TM4SF19	Q96DZ7	209 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	CD244	Q9BZW8	370 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	PRORY	Q9H606	182 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	PELI2	Q9HAT8	420 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	ACSS2	Q9NR19	701 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	CUTC	Q9NTM9	273 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	DNAJC11	Q9NVH1	559 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	GEMIN8	Q9NWZ8	242 aa	Known RBP	9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	CPSF2	Q9P2I0	782 aa	Known RBP	9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	PADI1	Q9ULC6	663 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	FASN	P49327	2511 aa	Known RBP	9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	PCSK5	Q92824	1860 aa		9.79	□□□□□ -0.84
MRPL55-223	ENST00000459783	ANKRD12	Q6UB98	2062 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	KCNE1B	A0A087WTH5	132 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783		A0A1B0GTL3	188 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	TRBC2	A0A5B9	178 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	CCDC189	A1A4V9	331 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	HYKK	A2RU49	373 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	PABPN1L	A6NDY0	278 aa	Known RBP	9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	C4orf51	C9J302	202 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783		K7ENP7	123 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	MAP3K7	O43318	606 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	FOXS1	O43638	330 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	CCNT2	O60583	730 aa	Known RBP	9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	IPO13	O94829	963 aa	Known RBP	9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	ONECUT2	O95948	504 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	FURIN	P09958	794 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	ATXN8OS	P0DMR3	200 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	HRH2	P25021	359 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	DLST	P36957	453 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	SCTR	P47872	440 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	ATP1A2	P50993	1020 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	CCR8	P51685	355 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	ZNF844	Q08AG5	666 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	HYAL2	Q12891	473 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	CDC16	Q13042	620 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	DNASE1L3	Q13609	305 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	E2F2	Q14209	437 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	GRM7	Q14831	915 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	SLC9A5	Q14940	896 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	NAA25	Q14CX7	972 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	TCTE1	Q5JU00	501 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	MANEA	Q5SRI9	462 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	INO80C	Q6PI98	192 aa	Predicted RBP	9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	LRRC69	Q6ZNQ3	347 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	TTLL10	Q6ZVT0	673 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	PRSS41	Q7RTY9	318 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	LRRC70	Q7Z2Q7	622 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	TCAIM	Q8N3R3	496 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	PTGR2	Q8N8N7	351 aa	Predicted RBP	9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	MFSD9	Q8NBP5	474 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	KCT2	Q8NC54	265 aa		9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	SNRNP27	Q8WVK2	155 aa	Known RBP	9.78	□□□□□ -0.84
MRPL55-223	ENST00000459783	MR1	Q95460	341 aa		9.78	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms