RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 KHNYNO15037 678 aaKnown RBP8.63□□□□□ -1.03
VPS50-207ENST00000458530 LSM1O15116 133 aaKnown RBP8.63□□□□□ -1.03
VPS50-207ENST00000458530 GPR42O15529 346 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 PEX11AO75192 247 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 CIB2O75838 187 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 MYO1DO94832 1006 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 SNRPB2P08579 225 aaKnown RBP8.63□□□□□ -1.03
VPS50-207ENST00000458530 KRT16P08779 473 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 CCNYL3P0C7X3 344 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 THEGLP0DJG4 465 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 CTSEP14091 401 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 PRPH2P23942 346 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 RPL10P27635 214 aaKnown RBP8.63□□□□□ -1.03
VPS50-207ENST00000458530 SHMT2P34897 504 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 ACTR1BP42025 376 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 KCNK10P57789 538 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 ACTR1AP61163 376 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 RPL6Q02878 288 aaKnown RBP8.63□□□□□ -1.03
VPS50-207ENST00000458530 TAP2Q03519 686 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 ART3Q13508 389 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 CUL3Q13618 768 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 E2F2Q14209 437 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 ALG11Q2TAA5 492 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 LINC01559Q495D7 138 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 MMEL1Q495T6 779 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 AGKQ53H12 422 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 COQ5Q5HYK3 327 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 PEAR1Q5VY43 1037 aaPredicted RBP8.63□□□□□ -1.03
VPS50-207ENST00000458530 TMEM198Q66K66 360 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 ATG9BQ674R7 924 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 MED27Q6P2C8 311 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 ABRAXAS1Q6UWZ7 409 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 XKR5Q6UX68 686 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 TMPRSS11BQ86T26 416 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 PARGQ86W56 976 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 ZFAND4Q86XD8 727 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 SNX32Q86XE0 403 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 HID1Q8IV36 788 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 TRIM48Q8IWZ4 208 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 DCBLD1Q8N8Z6 715 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 MFSD2AQ8NA29 543 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 PCYOX1LQ8NBM8 494 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 DEFB124Q8NES8 71 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 OR13H1Q8NG92 308 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 OR2L8Q8NGY9 312 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 HMGCLL1Q8TB92 370 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 ZFPM2Q8WW38 1151 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 SLC5A11Q8WWX8 675 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 STARD8Q92502 1023 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 SLC7A6OSQ96CW6 309 aaPredicted RBP8.63□□□□□ -1.03
VPS50-207ENST00000458530 CXorf40BQ96DE9 158 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 WDR34Q96EX3 536 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 CMTM7Q96FZ5 175 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 C3orf30Q96M34 536 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 BBC3Q96PG8 261 aaPredicted RBP8.63□□□□□ -1.03
VPS50-207ENST00000458530 SERPINI1Q99574 410 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 BRINP2Q9C0B6 783 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 KIR3DX1Q9H7L2 352 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 PELI2Q9HAT8 420 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 LRTM1Q9HBL6 345 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 MRPL40Q9NQ50 206 aaKnown RBP8.63□□□□□ -1.03
VPS50-207ENST00000458530 SDR39U1Q9NRG7 319 aaPredicted RBP8.63□□□□□ -1.03
VPS50-207ENST00000458530 GPR27Q9NS67 375 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 TM7SF3Q9NS93 570 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 INTS7Q9NVH2 962 aaKnown RBP8.63□□□□□ -1.03
VPS50-207ENST00000458530 C1orf109Q9NX04 203 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 PCYT1BQ9Y5K3 369 aaPredicted RBP8.63□□□□□ -1.03
VPS50-207ENST00000458530 GON4LQ3T8J9 2241 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 KIR2DS5A0A0G2JLQ3 304 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 A0A0G2JNG1 304 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 SPTY2D1-AS1A0A0U1RR47 76 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 A0A1B0GTL3 188 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 ANKRD65E5RJM6 399 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 KIR2DS3K7RE56 304 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 ANGPT2O15123 496 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 WFS1O76024 890 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 C1GALT1C1LP0DN25 315 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 PRPS2P11908 318 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 F3P13726 295 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 EPORP19235 508 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 HRH2P25021 359 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 GSTM2P28161 218 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 CD38P28907 300 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 PKLRP30613 574 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 GRK3P35626 688 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 PGM1P36871 562 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 HTR6P50406 440 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 NUDT2P50583 147 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 CLNS1AP54105 237 aaKnown RBP8.62□□□□□ -1.03
VPS50-207ENST00000458530 RPL38P63173 70 aaKnown RBP8.62□□□□□ -1.03
VPS50-207ENST00000458530 RACK1P63244 317 aaKnown RBP8.62□□□□□ -1.03
VPS50-207ENST00000458530 ABATP80404 500 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 DOC2AQ14183 400 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 GRB7Q14451 532 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 KIR2DS5Q14953 304 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 ABRAXAS2Q15018 415 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 RPE65Q16518 533 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 AP5B1Q2VPB7 878 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 CCSMST1Q4G0I0 132 aa8.62□□□□□ -1.03
VPS50-207ENST00000458530 SPIN4Q56A73 249 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms