RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 LRRC37A5PQ49AS3 106 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 INO80EQ8NBZ0 244 aaPredicted RBP19.14■□□□□ 0.65
SNX27-204ENST00000458013 NXPE2Q96DL1 559 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 ATXN7L1Q9ULK2 861 aaPredicted RBP19.14■□□□□ 0.65
SNX27-204ENST00000458013 RPL26L1Q9UNX3 145 aaKnown RBP19.14■□□□□ 0.65
SNX27-204ENST00000458013 RPL36Q9Y3U8 105 aaKnown RBP19.14■□□□□ 0.65
SNX27-204ENST00000458013 FAM170BA6NMN3 283 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 NPIPA5E9PKD4 350 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 E2F3O00716 465 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 WNT9AO14904 365 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 VILLO15195 856 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 RGS19P49795 217 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 YBEYP58557 167 aaPredicted RBP19.14■□□□□ 0.65
SNX27-204ENST00000458013 TRIM74Q86UV6 250 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 NPIPA1Q9UND3 350 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 IGLV3-22A0A075B6J6 115 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 XPNPEP2O43895 674 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 SSX5O60225 188 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 TUBG1P23258 451 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 ADH7P40394 386 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 SLC18A2Q05940 514 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 GPALPP1Q8IXQ4 340 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 PAK6Q9NQU5 681 aaPredicted RBP19.14■□□□□ 0.65
SNX27-204ENST00000458013 TNFRSF10DQ9UBN6 386 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 CYTH4Q9UIA0 394 aa19.14■□□□□ 0.65
SNX27-204ENST00000458013 SLC33A1O00400 549 aaPredicted RBP19.13■□□□□ 0.65
SNX27-204ENST00000458013 MATN1P21941 496 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 VAMP1P23763 118 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 RASGEF1BQ0VAM2 473 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 GALNT10Q86SR1 603 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 LMX1AQ8TE12 382 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 KLHL6Q8WZ60 621 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 SLC22A4Q9H015 551 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 OR51B5Q9H339 312 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 IL33O95760 270 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 ERVK-8P63133 956 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 DBF4BQ8NFT6 615 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 OR2L2Q8NH16 312 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 CRELD1Q96HD1 420 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 SMURF2Q9HAU4 748 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 AASSQ9UDR5 926 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 PLCL2Q9UPR0 1127 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 TLR6Q9Y2C9 796 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 TLX3O43711 291 aaPredicted RBP19.13■□□□□ 0.65
SNX27-204ENST00000458013 SUV39H2Q9H5I1 410 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 HEBP2Q9Y5Z4 205 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 GRPRP30550 384 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 MSS51Q4VC12 460 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 NOXRED1Q6NXP6 359 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 PHTF2Q8N3S3 785 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 RGMAQ96B86 450 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 TMEM209Q96SK2 561 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 LRRC3Q9BY71 257 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 ZNF700Q9H0M5 742 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 LDAHQ9H6V9 325 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 TMEM150CB9EJG8 249 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 H3BNX3 289 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 TLX2O43763 284 aaPredicted RBP19.13■□□□□ 0.65
SNX27-204ENST00000458013 ATP1B2P14415 290 aaPredicted RBP19.13■□□□□ 0.65
SNX27-204ENST00000458013 IST1P53990 364 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 ARPC4P59998 168 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 NOGQ13253 232 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 DAG1Q14118 895 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 CEACAM20Q6UY09 585 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 NAT8LQ8N9F0 302 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 CASTOR1Q8WTX7 329 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 CCM2Q9BSQ5 444 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 MED11Q9P086 117 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 ABI3Q9P2A4 366 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 SQORQ9Y6N5 450 aa19.13■□□□□ 0.65
SNX27-204ENST00000458013 DNAJA1P31689 397 aaKnown RBP19.12■□□□□ 0.65
SNX27-204ENST00000458013 FNTBP49356 437 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 PPP1R3AQ16821 1122 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 TSPAN18Q96SJ8 248 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 TFB2MQ9H5Q4 396 aaKnown RBP19.12■□□□□ 0.65
SNX27-204ENST00000458013 CLDND1Q9NY35 253 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 LYPLA2O95372 231 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 ADH5P11766 374 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 UNGP13051 313 aaPredicted RBP19.12■□□□□ 0.65
SNX27-204ENST00000458013 OGNP20774 298 aaKnown RBP19.12■□□□□ 0.65
SNX27-204ENST00000458013 S100A2P29034 98 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 PREPP48147 710 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 SNU13P55769 128 aaKnown RBP19.12■□□□□ 0.65
SNX27-204ENST00000458013 MBLAC2Q68D91 279 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 SLC37A3Q8NCC5 494 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 PXYLP1Q8TE99 480 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 ZC3H10Q96K80 434 aaKnown RBP19.12■□□□□ 0.65
SNX27-204ENST00000458013 WNT6Q9Y6F9 365 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 RLN2P04090 185 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 G6PDP11413 515 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 MBOAT1Q6ZNC8 495 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 C14orf105Q9NVL8 296 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 HS3ST4Q9Y661 456 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 SCDO00767 359 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 CCND3P30281 292 aaPredicted RBP19.12■□□□□ 0.65
SNX27-204ENST00000458013 ARSJQ5FYB0 599 aaPredicted RBP19.12■□□□□ 0.65
SNX27-204ENST00000458013 LRRC70Q7Z2Q7 622 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 RNF130Q86XS8 419 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 FAM46DQ8NEK8 389 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 PHOSPHO1Q8TCT1 267 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms