RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 KCNE2Q9Y6J6 123 aa22.11■■□□□ 1.13
CBX3-204ENST00000456948 MDC1Q14676 2089 aaKnown RBP22.1■■□□□ 1.13
CBX3-204ENST00000456948 HAT1O14929 419 aa22.1■■□□□ 1.13
CBX3-204ENST00000456948 PHGDHO43175 533 aaKnown RBP22.1■■□□□ 1.13
CBX3-204ENST00000456948 S100BP04271 92 aaPredicted RBP22.1■■□□□ 1.13
CBX3-204ENST00000456948 TSNQ15631 228 aaKnown RBP22.1■■□□□ 1.13
CBX3-204ENST00000456948 PPP1R3AQ16821 1122 aa22.1■■□□□ 1.13
CBX3-204ENST00000456948 CDKL4Q5MAI5 379 aa22.1■■□□□ 1.13
CBX3-204ENST00000456948 GPSM1Q86YR5 675 aa22.1■■□□□ 1.13
CBX3-204ENST00000456948 ANKRD49Q8WVL7 239 aa22.1■■□□□ 1.13
CBX3-204ENST00000456948 PYCR2Q96C36 320 aa22.1■■□□□ 1.13
CBX3-204ENST00000456948 CAPS2Q9BXY5 557 aa22.1■■□□□ 1.13
CBX3-204ENST00000456948 SLC26A1Q9H2B4 701 aa22.1■■□□□ 1.13
CBX3-204ENST00000456948 ZNF282Q9UDV7 671 aaPredicted RBP22.1■■□□□ 1.13
CBX3-204ENST00000456948 RUVBL1Q9Y265 456 aaKnown RBP22.1■■□□□ 1.13
CBX3-204ENST00000456948 ARGFXA6NJG6 315 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 B8ZZF3 427 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 NRP2O60462 931 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 KLHL41O60662 606 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 CDH1P12830 882 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 FBLP22087 321 aaKnown RBP22.09■■□□□ 1.13
CBX3-204ENST00000456948 SLC26A3P40879 764 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 OR1D4P47884 311 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 AVPR1BP47901 424 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 CSNK1G2P78368 415 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 NFKB2Q00653 900 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 NFATC3Q12968 1075 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 FAM53BQ14153 422 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 ZKSCAN8Q15776 578 aaPredicted RBP22.09■■□□□ 1.13
CBX3-204ENST00000456948 UAP1Q16222 522 aaPredicted RBP22.09■■□□□ 1.13
CBX3-204ENST00000456948 TAOK1Q7L7X3 1001 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 ABHD11Q8NFV4 315 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 ADAMTS17Q8TE56 1095 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 SLC5A11Q8WWX8 675 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 YIPF2Q9BWQ6 316 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 DRC3Q9H069 523 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 ING2Q9H160 280 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 NMRAL1Q9HBL8 299 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 NINJ2Q9NZG7 142 aa22.09■■□□□ 1.13
CBX3-204ENST00000456948 SPTA1P02549 2419 aa22.08■■□□□ 1.13
CBX3-204ENST00000456948 H2AFYO75367 372 aaKnown RBP22.08■■□□□ 1.13
CBX3-204ENST00000456948 C1QAP02745 245 aa22.08■■□□□ 1.13
CBX3-204ENST00000456948 SLC35G6P0C7Q6 338 aa22.08■■□□□ 1.13
CBX3-204ENST00000456948 THOC6Q86W42 341 aaKnown RBP22.08■■□□□ 1.13
CBX3-204ENST00000456948 PLD3Q8IV08 490 aa22.08■■□□□ 1.13
CBX3-204ENST00000456948 METTL27Q8N6F8 245 aaPredicted RBP22.08■■□□□ 1.13
CBX3-204ENST00000456948 STAG3L4Q8TBR4 150 aa22.08■■□□□ 1.13
CBX3-204ENST00000456948 ABHD17AQ96GS6 310 aa22.08■■□□□ 1.13
CBX3-204ENST00000456948 ACSS3Q9H6R3 686 aa22.08■■□□□ 1.13
CBX3-204ENST00000456948 ACOT9Q9Y305 439 aa22.08■■□□□ 1.13
CBX3-204ENST00000456948 MAU2Q9Y6X3 613 aa22.08■■□□□ 1.13
CBX3-204ENST00000456948 IPO13O94829 963 aaKnown RBP22.07■■□□□ 1.12
CBX3-204ENST00000456948 INHBAP08476 426 aa22.07■■□□□ 1.12
CBX3-204ENST00000456948 CD1DP15813 335 aa22.07■■□□□ 1.12
CBX3-204ENST00000456948 CXCR2P25025 360 aa22.07■■□□□ 1.12
CBX3-204ENST00000456948 SKP1P63208 163 aa22.07■■□□□ 1.12
CBX3-204ENST00000456948 TGFBIQ15582 683 aa22.07■■□□□ 1.12
CBX3-204ENST00000456948 NKG7Q16617 165 aa22.07■■□□□ 1.12
CBX3-204ENST00000456948 HKDC1Q2TB90 917 aa22.07■■□□□ 1.12
CBX3-204ENST00000456948 LACTB2Q53H82 288 aaPredicted RBP22.07■■□□□ 1.12
CBX3-204ENST00000456948 ASPGQ86U10 573 aa22.07■■□□□ 1.12
CBX3-204ENST00000456948 SLC13A3Q8WWT9 602 aa22.07■■□□□ 1.12
CBX3-204ENST00000456948 MIEF2Q96C03 454 aa22.07■■□□□ 1.12
CBX3-204ENST00000456948 MRRFQ96E11 262 aaKnown RBP22.07■■□□□ 1.12
CBX3-204ENST00000456948 MMABQ96EY8 250 aaPredicted RBP22.07■■□□□ 1.12
CBX3-204ENST00000456948 UBXN10Q96LJ8 280 aa22.07■■□□□ 1.12
CBX3-204ENST00000456948 AIF1LQ9BQI0 150 aa22.07■■□□□ 1.12
CBX3-204ENST00000456948 CDC42EP4Q9H3Q1 356 aaKnown RBP22.07■■□□□ 1.12
CBX3-204ENST00000456948 SEMA3GQ9NS98 782 aa22.07■■□□□ 1.12
CBX3-204ENST00000456948 IKZF3Q9UKT9 509 aa22.07■■□□□ 1.12
CBX3-204ENST00000456948 RNF112Q9ULX5 631 aa22.07■■□□□ 1.12
CBX3-204ENST00000456948 SLC22A14Q9Y267 594 aa22.07■■□□□ 1.12
CBX3-204ENST00000456948 FER1L5A0AVI2 2057 aa22.07■■□□□ 1.12
CBX3-204ENST00000456948 A0A087X1B8 175 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 CCDC189A1A4V9 331 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 OR1F1O43749 312 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 FAM155BO75949 473 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 WISP3O95389 354 aaPredicted RBP22.06■■□□□ 1.12
CBX3-204ENST00000456948 ACSL3O95573 720 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 GNAZP19086 355 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 CCL11P51671 97 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 DSG2Q14126 1118 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 MROH9Q5TGP6 573 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 SULT1C3Q6IMI6 304 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 TCTN3Q6NUS6 607 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 MFSD9Q8NBP5 474 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 CLEC1AQ8NC01 280 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 OR4K1Q8NGD4 311 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 KIAA1191Q96A73 305 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 RHBDF1Q96CC6 855 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 C10orf90Q96M02 699 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 PELI2Q9HAT8 420 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 SLC22A11Q9NSA0 550 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 WWOXQ9NZC7 414 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 CD274Q9NZQ7 290 aa22.06■■□□□ 1.12
CBX3-204ENST00000456948 TRBC2A0A5B9 178 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 FEZF1A0PJY2 475 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 WDR47O94967 919 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 LTA4HP09960 611 aaKnown RBP22.05■■□□□ 1.12
CBX3-204ENST00000456948 PLA2G2AP14555 144 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms