RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 PPP1R3BQ86XI6 285 aa17.11■□□□□ 0.33
FAM239A-203ENST00000456563 C10orf107Q8IVU9 208 aa17.11■□□□□ 0.33
FAM239A-203ENST00000456563 LSMEM2Q8N112 164 aa17.11■□□□□ 0.33
FAM239A-203ENST00000456563 N4BP2L2Q92802 583 aaPredicted RBP17.11■□□□□ 0.33
FAM239A-203ENST00000456563 PTCD3Q96EY7 689 aaKnown RBP17.11■□□□□ 0.33
FAM239A-203ENST00000456563 ZNF285Q96NJ3 590 aa17.11■□□□□ 0.33
FAM239A-203ENST00000456563 SLC46A1Q96NT5 459 aa17.11■□□□□ 0.33
FAM239A-203ENST00000456563 NSUN5Q96P11 429 aaKnown RBP17.11■□□□□ 0.33
FAM239A-203ENST00000456563 FCRL4Q96PJ5 515 aa17.11■□□□□ 0.33
FAM239A-203ENST00000456563 TEFMQ96QE5 360 aaKnown RBP17.11■□□□□ 0.33
FAM239A-203ENST00000456563 OR2A5Q96R48 311 aa17.11■□□□□ 0.33
FAM239A-203ENST00000456563 ZPBPQ9BS86 351 aa17.11■□□□□ 0.33
FAM239A-203ENST00000456563 EFCAB11Q9BUY7 163 aa17.11■□□□□ 0.33
FAM239A-203ENST00000456563 NTMT1Q9BV86 223 aa17.11■□□□□ 0.33
FAM239A-203ENST00000456563 PITHD1Q9GZP4 211 aaPredicted RBP17.11■□□□□ 0.33
FAM239A-203ENST00000456563 NT5DC2Q9H857 520 aa17.11■□□□□ 0.33
FAM239A-203ENST00000456563 NOL11Q9H8H0 719 aaKnown RBP17.11■□□□□ 0.33
FAM239A-203ENST00000456563 APMAPQ9HDC9 416 aa17.11■□□□□ 0.33
FAM239A-203ENST00000456563 GEMIN8Q9NWZ8 242 aaKnown RBP17.11■□□□□ 0.33
FAM239A-203ENST00000456563 SERTAD3Q9UJW9 196 aa17.11■□□□□ 0.33
FAM239A-203ENST00000456563 ADAMTS20P59510 1910 aa17.11■□□□□ 0.33
FAM239A-203ENST00000456563 FEZF1A0PJY2 475 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 TMEM150CB9EJG8 249 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 H3BMH7 237 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 OR7A17O14581 309 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 LCMT2O60294 686 aaKnown RBP17.1■□□□□ 0.33
FAM239A-203ENST00000456563 UGDHO60701 494 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 BPGMP07738 259 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 NAGLUP54802 743 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 CDH13P55290 713 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 ITGA1P56199 1179 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 MEF2AQ02078 507 aaPredicted RBP17.1■□□□□ 0.33
FAM239A-203ENST00000456563 CLCQ05315 142 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 ASPHQ12797 758 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 LAPTM5Q13571 262 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 SLBPQ14493 270 aaKnown RBP eCLIP17.1■□□□□ 0.33
FAM239A-203ENST00000456563 KIF26BQ2KJY2 2108 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.1■□□□□ 0.33
FAM239A-203ENST00000456563 DCAF12Q5T6F0 453 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 TMEM164Q5U3C3 297 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 FRMPD2BQ6IN97 320 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 PLD3Q8IV08 490 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 KRT78Q8N1N4 520 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 TBC1D19Q8N5T2 526 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 L3MBTL4Q8NA19 623 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 ZNF740Q8NDX6 193 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 OR1L3Q8NH93 324 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 PPP4R1Q8TF05 950 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 USP7Q93009 1102 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 NXPE2Q96DL1 559 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 SELENOSQ9BQE4 189 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 ASPSCR1Q9BZE9 553 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 SPNS1Q9H2V7 528 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 GSTO2Q9H4Y5 243 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 PCDHGA4Q9Y5G9 962 aa17.1■□□□□ 0.33
FAM239A-203ENST00000456563 LOC105369274A0A096LPK9 316 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 LOC102723532A0A0G2JNH3 316 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 MED19A0JLT2 244 aaPredicted RBP17.09■□□□□ 0.33
FAM239A-203ENST00000456563 CDRT15L2A8MXV6 281 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 C9orf172C9J069 976 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 H0YGG7 62 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 NVLO15381 856 aaKnown RBP17.09■□□□□ 0.33
FAM239A-203ENST00000456563 MLYCDO95822 493 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 CD22P20273 847 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 RBMS1P29558 406 aaKnown RBP17.09■□□□□ 0.33
FAM239A-203ENST00000456563 BCL6P41182 706 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 HNF4AP41235 474 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 SCTRP47872 440 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 SERPINB4P48594 390 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 ARF3P61204 181 aaPredicted RBP17.09■□□□□ 0.33
FAM239A-203ENST00000456563 CYP4F3Q08477 520 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 PAGE2BQ5JRK9 111 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 TCTE1Q5JU00 501 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 LIPJQ5W064 366 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 RPS27LQ71UM5 84 aaKnown RBP17.09■□□□□ 0.33
FAM239A-203ENST00000456563 OR4N4Q8N0Y3 316 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 CCNYL1Q8N7R7 359 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 MFSD9Q8NBP5 474 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 ATP6V1E2Q96A05 226 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 CTRCQ99895 268 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 MECRQ9BV79 373 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 ACTR8Q9H981 624 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 SYNPO2LQ9H987 977 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 SEMA4BQ9NPR2 832 aaPredicted RBP17.09■□□□□ 0.33
FAM239A-203ENST00000456563 ASCL3Q9NQ33 180 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 ANGPTL2Q9UKU9 493 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 PCDHGA7Q9Y5G6 932 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 B3GALT1Q9Y5Z6 326 aa17.09■□□□□ 0.33
FAM239A-203ENST00000456563 SPTBN2O15020 2390 aa17.08■□□□□ 0.33
FAM239A-203ENST00000456563 HEATR5BQ9P2D3 2071 aa17.08■□□□□ 0.33
FAM239A-203ENST00000456563 BIRC5O15392 142 aa17.08■□□□□ 0.32
FAM239A-203ENST00000456563 OR1F1O43749 312 aa17.08■□□□□ 0.32
FAM239A-203ENST00000456563 OR2B3O76000 313 aa17.08■□□□□ 0.32
FAM239A-203ENST00000456563 OTCP00480 354 aa17.08■□□□□ 0.32
FAM239A-203ENST00000456563 CTSBP07858 339 aa17.08■□□□□ 0.32
FAM239A-203ENST00000456563 AHRP35869 848 aa17.08■□□□□ 0.32
FAM239A-203ENST00000456563 CCNG1P51959 295 aa17.08■□□□□ 0.32
FAM239A-203ENST00000456563 VSX2P58304 361 aaPredicted RBP17.08■□□□□ 0.32
FAM239A-203ENST00000456563 TRAF3Q13114 568 aa17.08■□□□□ 0.32
FAM239A-203ENST00000456563 HIST2H2ACQ16777 129 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms