RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 ERVFC1P60507 584 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 SRSF11Q05519 484 aaKnown RBP12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 FGL1Q08830 312 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 SLC10A7Q0GE19 358 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 CDK5R2Q13319 367 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 AADACL4Q5VUY2 407 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 HIST3H2AQ7L7L0 130 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 PRSS48Q7RTY5 328 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 ZNF438Q7Z4V0 828 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 HS3ST5Q8IZT8 346 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 LILRA2Q8N149 483 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 NATD1Q8N6N6 113 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 REPS2Q8NFH8 660 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 RPL3LQ92901 407 aaKnown RBP12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 CLP1Q92989 425 aaKnown RBP12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 HIST1H2ACQ93077 130 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 CLIP3Q96DZ5 547 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 RNF31Q96EP0 1072 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 ZSWIM3Q96MP5 696 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 ZDHHC15Q96MV8 337 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 FBXO44Q9H4M3 255 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 SLAMF7Q9NQ25 335 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 MAGED1Q9Y5V3 778 aaPredicted RBP12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 ADAM23O75077 832 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 ALDH1A2O94788 518 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 CD247P20963 164 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 HTR1EP28566 365 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 OR1E2P47887 323 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 ARCN1P48444 511 aaKnown RBP12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 RPIAP49247 311 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 S100A10P60903 97 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 SLC25A11Q02978 314 aaKnown RBP12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 EMX1Q04741 257 aaPredicted RBP12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 NPRL3Q12980 569 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 PTGR1Q14914 329 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 SPHARQ15513 63 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 TATDN3Q17R31 274 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 SLC36A3Q495N2 470 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 LYSMD3Q7Z3D4 306 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 UBE2E3Q969T4 207 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 ZNF649Q9BS31 505 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 FAIM2Q9BWQ8 316 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 TSSK6Q9BXA6 273 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 KCNN3Q9UGI6 736 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 HCN4Q9Y3Q4 1203 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 PCDHGA8Q9Y5G5 932 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 UBIAD1Q9Y5Z9 338 aa12.02□□□□□ -0.49
NEDD4L-208ENST00000456173 A0A1W2PRQ8 180 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 SLC19A2O60779 497 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 SCO1O75880 301 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 PAK4O96013 591 aaPredicted RBP12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 IL1BP01584 269 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 CKMP06732 381 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 MC2RQ01718 297 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 CREMQ03060 361 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 CHIT1Q13231 466 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 CYP27C1Q4G0S4 372 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 LCN8Q6JVE9 175 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 DENND1CQ8IV53 801 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 FAM46DQ8NEK8 389 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 CASTOR1Q8WTX7 329 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 TFB2MQ9H5Q4 396 aaKnown RBP12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 NWD1Q149M9 1564 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 PRSS51A0A1B0GVH4 220 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 PAPSS2O95340 614 aaPredicted RBP12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 POU6F2P78424 691 aaPredicted RBP12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 TMPRSS11BQ86T26 416 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 CHDHQ8NE62 594 aaPredicted RBP12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 OR7G2Q8NG99 324 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 LMAN2LQ9H0V9 348 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 VRTNQ9H8Y1 702 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 ELP3Q9H9T3 547 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 IFT46Q9NQC8 304 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 PRDM9Q9NQV7 894 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 CTDSP2O14595 271 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 VNN1O95497 513 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 GLUD1P00367 558 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 WEE1P30291 646 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 PTPN9P43378 593 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 HSPB3Q12988 150 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 GPR19Q15760 415 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 COL28A1Q2UY09 1125 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 SPATS1Q496A3 300 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 HDDC3Q8N4P3 179 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 DNAJB8Q8NHS0 232 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 CLEC4CQ8WTT0 213 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 EXOSC8Q96B26 276 aaKnown RBP12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 MTERF1Q99551 399 aaKnown RBP12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 OR10A4Q9H209 315 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 FARSAQ9Y285 508 aaKnown RBP12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 DISP2A7MBM2 1401 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 PPLO60437 1756 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 TRBC2A0A5B9 178 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 PDCD5O14737 125 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 SLC7A4O43246 635 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 ALDOBP05062 364 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 HTR1BP28222 390 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 C9orf64Q5T6V5 341 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 DEFB132Q7Z7B7 95 aa12.01□□□□□ -0.49
NEDD4L-208ENST00000456173 MINDY1Q8N5J2 469 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms