RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ATP6V1C2Q8NEY4 427 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 C1orf216Q8TAB5 229 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 HPSE2Q8WWQ2 592 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 TSNAXQ99598 290 aaKnown RBP5.09□□□□□ -1.6
CSMD3-204ENST00000455883 C19orf43Q9BQ61 176 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 RGCCQ9H4X1 137 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 ALG9Q9H6U8 611 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 PHPT1Q9NRX4 125 aaPredicted RBP5.09□□□□□ -1.6
CSMD3-204ENST00000455883 GTF2A1LQ9UNN4 478 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 NOP16Q9Y3C1 178 aaKnown RBP5.09□□□□□ -1.6
CSMD3-204ENST00000455883 WDR87Q6ZQQ6 2873 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 ROBO2Q9HCK4 1378 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 TNS2Q63HR2 1409 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 SLC22A31A6NKX4 558 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 MYBP10242 640 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CASP1P29466 404 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 RBMS1P29558 406 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 LAMTOR4Q0VGL1 99 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 GRB10Q13322 594 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 DOK6Q6PKX4 331 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CYP2R1Q6VVX0 501 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 SLC36A4Q6YBV0 504 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 URM1Q9BTM9 101 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 QRSL1Q9H0R6 528 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 TCEAL2Q9H3H9 227 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 REXO2Q9Y3B8 237 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 A0A0D9SG52 128 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 MOXD2PA6NHM9 499 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 SLC16A5O15375 505 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 H1F0P07305 194 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 UBBP0CG47 229 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 MBL2P11226 248 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 OR1G1P47890 313 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 RPS27AP62979 156 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 UBA52P62987 128 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 FOXO4P98177 505 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 MTM1Q13496 603 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 RBM39Q14498 530 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 FUT11Q495W5 492 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 KDELC1Q6UW63 502 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 RFPL4BQ6ZWI9 263 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 ANKFN1Q8N957 763 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 NACC2Q96BF6 587 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 SLC6A7Q99884 636 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF416Q9BWM5 594 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF446Q9NWS9 450 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CNTN3Q9P232 1028 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CDC14AQ9UNH5 594 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 MN1Q10571 1320 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 PIEZO1Q92508 2521 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 OTOGLQ3ZCN5 2332 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 AGAP5A6NIR3 686 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 RNF212BA8MTL3 300 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 AOC2O75106 756 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 C22orf31O95567 290 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 MEF2AQ02078 507 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 RPL6Q02878 288 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 TAF1AQ15573 450 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 FRRS1Q6ZNA5 592 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 ABHD13Q7L211 337 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 APTXQ7Z2E3 356 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 ARL14Q8N4G2 192 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 FITM2Q8N6M3 262 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 LSM14AQ8ND56 463 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 FGGYQ96C11 551 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 NUDT9Q9BW91 350 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 TMEM39BQ9GZU3 492 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 WDR26Q9H7D7 661 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 POLMQ9NP87 494 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 POLE4Q9NR33 117 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 A8MXE2 369 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 NT5C1B-RDH14C9J2C7 533 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 MID1O15344 667 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 BMP2P12643 396 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CD36P16671 472 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 LHCGRP22888 699 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 GPR143P51810 404 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 MLLT1Q03111 559 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 XKR6Q5GH73 641 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CCNJQ5T5M9 372 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 FOXRED1Q96CU9 486 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 MALSU1Q96EH3 234 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 SEMA6BQ9H3T3 888 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 HSPB2A8KAH6 182 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 H0YGN5 161 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 RHCEP18577 417 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 BMP6P22004 513 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CERS1P27544 350 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 BMP8BP34820 402 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 PRKCZQ05513 592 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 HSPB2Q16082 182 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 DPYSL2Q16555 572 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 AKR1C8PQ5T2L2 129 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CES3Q6UWW8 571 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 BMP8AQ7Z5Y6 402 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF366Q8N895 744 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 TMEM234Q8WY98 164 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 SEMA4DQ92854 862 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CNOT2Q9NZN8 540 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 TMEM59LQ9UK28 342 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms