RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 DCLK1O15075 740 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 CD2P06729 351 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 MYF6P23409 242 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 STOMP27105 288 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 STXBP1P61764 594 aaKnown RBP11.71□□□□□ -0.54
SEC16A-207ENST00000453963 COQ5Q5HYK3 327 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 TPGS2Q68CL5 300 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 PYCR2Q96C36 320 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 TMEM80Q96HE8 168 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 TSGA13Q96PP4 275 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 RNF39Q9H2S5 420 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 VRTNQ9H8Y1 702 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 ZDHHC4Q9NPG8 344 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 C14orf105Q9NVL8 296 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 PAK1IP1Q9NWT1 392 aaPredicted RBP11.71□□□□□ -0.54
SEC16A-207ENST00000453963 UCKL1Q9NWZ5 548 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 MARK1Q9P0L2 795 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 P2RX2Q9UBL9 471 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 TNFRSF10DQ9UBN6 386 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 ASB3Q9Y575 518 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 ACRP10323 421 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 CPN2P22792 545 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 LEPRP48357 1165 aaKnown RBP11.71□□□□□ -0.54
SEC16A-207ENST00000453963 ADAM8P78325 824 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 ANKDD1AQ495B1 522 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 KIAA1161Q6NSJ0 714 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 SPAG16Q8N0X2 631 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 C1orf52Q8N6N3 182 aaKnown RBP11.71□□□□□ -0.54
SEC16A-207ENST00000453963 FAM46DQ8NEK8 389 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 RHEBL1Q8TAI7 183 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 CEP76Q8TAP6 659 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 ZNF431Q8TF32 576 aaPredicted RBP11.71□□□□□ -0.54
SEC16A-207ENST00000453963 PIGKQ92643 395 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 FCRL3Q96P31 734 aaPredicted RBP11.71□□□□□ -0.54
SEC16A-207ENST00000453963 SMOXQ9NWM0 555 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 ZDHHC7Q9NXF8 308 aa11.71□□□□□ -0.54
SEC16A-207ENST00000453963 LRRC72A6NJI9 287 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 J3KR12 359 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 DIRAS1O95057 198 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 CHRM1P11229 460 aaPredicted RBP11.7□□□□□ -0.54
SEC16A-207ENST00000453963 BMP2P12643 396 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 ITGA3P26006 1051 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 ACADLP28330 430 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 GGT5P36269 586 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 CAP1Q01518 475 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 TMEM53Q6P2H8 277 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 NPLOC4Q8TAT6 608 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 CCDC107Q8WV48 283 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 KCNJ9Q92806 393 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 LGALS12Q96DT0 336 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 CMTM7Q96FZ5 175 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 ZNF514Q96K75 400 aaPredicted RBP11.7□□□□□ -0.54
SEC16A-207ENST00000453963 HS3ST4Q9Y661 456 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 MYH8P13535 1937 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 PEAK1Q9H792 1746 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 TRBV23OR9-2A0A075B6M9 112 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 ERVK-21P61565 698 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 SERINC3Q13530 473 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 ZNF367Q7RTV3 350 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 IFNLR1Q8IU57 520 aaPredicted RBP11.7□□□□□ -0.54
SEC16A-207ENST00000453963 SIAH1Q8IUQ4 282 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 CHCHD4Q8N4Q1 142 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 AQP11Q8NBQ7 271 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 CHST4Q8NCG5 386 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 PEX13Q92968 403 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 ALPK1Q96QP1 1244 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 PKP4Q99569 1192 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 WRAP53Q9BUR4 548 aaKnown RBP11.7□□□□□ -0.54
SEC16A-207ENST00000453963 OR2B2Q9GZK3 357 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 EBF1Q9UH73 591 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 ZNF701M0R085 212 aaPredicted RBP11.7□□□□□ -0.54
SEC16A-207ENST00000453963 ARL6IP5O75915 188 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 DNASE1L1P49184 302 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 NFATC3Q12968 1075 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 ZNF234Q14588 700 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 MINDY4Q4G0A6 757 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 C1orf220Q5T0J3 134 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 UBXN11Q5T124 520 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 LCN8Q6JVE9 175 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 QSOX2Q6ZRP7 698 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 ANKRD13BQ86YJ7 626 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 C1orf216Q8TAB5 229 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 ARNTL2Q8WYA1 636 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 ZSWIM3Q96MP5 696 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 FBXW2Q9UKT8 454 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 ABCG2Q9UNQ0 655 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 PHF24Q9UPV7 400 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 PCDHGA3Q9Y5H0 932 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 IFT172Q9UG01 1749 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 PPEF2O14830 753 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 RASGRP1O95267 797 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 SLC35E2BP0CK96 405 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 HSD17B1P14061 328 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 KCNE1P15382 129 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 GSTM2P28161 218 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 RYKP34925 604 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 MAGEA2P43356 314 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 NIPAL4Q0D2K0 466 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 TBRG1Q3YBR2 411 aa11.7□□□□□ -0.54
SEC16A-207ENST00000453963 TMEM236Q5W0B7 351 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms