RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 RPS9P46781 194 aaKnown RBP11.36□□□□□ -0.59
VTA1-203ENST00000452973 GALK1P51570 392 aa11.36□□□□□ -0.59
VTA1-203ENST00000452973 RAE1P78406 368 aaKnown RBP11.36□□□□□ -0.59
VTA1-203ENST00000452973 DLX2Q07687 328 aaPredicted RBP11.36□□□□□ -0.59
VTA1-203ENST00000452973 VAC14Q08AM6 782 aa11.36□□□□□ -0.59
VTA1-203ENST00000452973 HYAL1Q12794 435 aa11.36□□□□□ -0.59
VTA1-203ENST00000452973 SPIDRQ14159 915 aa11.36□□□□□ -0.59
VTA1-203ENST00000452973 ZNF658BQ4V348 819 aaPredicted RBP11.36□□□□□ -0.59
VTA1-203ENST00000452973 KIAA1211LQ6NV74 962 aa11.36□□□□□ -0.59
VTA1-203ENST00000452973 XKR5Q6UX68 686 aa11.36□□□□□ -0.59
VTA1-203ENST00000452973 ZNF765Q7L2R6 523 aa11.36□□□□□ -0.59
VTA1-203ENST00000452973 ZNF551Q7Z340 670 aaPredicted RBP11.36□□□□□ -0.59
VTA1-203ENST00000452973 CARM1Q86X55 608 aa11.36□□□□□ -0.59
VTA1-203ENST00000452973 OR4K1Q8NGD4 311 aa11.36□□□□□ -0.59
VTA1-203ENST00000452973 MAGEB10Q96LZ2 347 aaPredicted RBP11.36□□□□□ -0.59
VTA1-203ENST00000452973 TRMT61BQ9BVS5 477 aaKnown RBP11.36□□□□□ -0.59
VTA1-203ENST00000452973 UGT2B28Q9BY64 529 aa11.36□□□□□ -0.59
VTA1-203ENST00000452973 MSRAQ9UJ68 235 aa11.36□□□□□ -0.59
VTA1-203ENST00000452973 TRBV5-3A0A0A0MS03 114 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 PIPSLA2A3N6 862 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 H0YJX3 145 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 VEGFDO43915 354 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 PCDH7O60245 1069 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 RASAL1O95294 804 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 C1GALT1C1LP0DN25 315 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 ACP5P13686 325 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 PTPN6P29350 595 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 MC1RQ01726 317 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 C16orf72Q14CZ0 275 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 PON2Q15165 354 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 DUOXA1Q1HG43 343 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 ITPRIPL2Q3MIP1 535 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 CPTPQ5TA50 214 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 AGBL4Q5VU57 503 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 LRRTM4Q86VH4 590 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 TRIML2Q8N7C3 387 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 PAPD5Q8NDF8 572 aaKnown RBP11.35□□□□□ -0.59
VTA1-203ENST00000452973 TNIP2Q8NFZ5 429 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 OR14C36Q8NHC7 312 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 DUSP26Q9BV47 211 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 SORBS1Q9BX66 1292 aaKnown RBP11.35□□□□□ -0.59
VTA1-203ENST00000452973 HDAC8Q9BY41 377 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 FZD3Q9NPG1 666 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 DZANK1Q9NVP4 752 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 VPS4AQ9UN37 437 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 GPR34Q9UPC5 381 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 TRIOO75962 3097 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 NOBOXO60393 691 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 LAMP2P13473 410 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 PRKACGP22612 351 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 PSMB5P28074 263 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 CLCNKAP51800 687 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 TXNL4AP83876 142 aaKnown RBP11.35□□□□□ -0.59
VTA1-203ENST00000452973 CAMK2GQ13555 558 aaPredicted RBP11.35□□□□□ -0.59
VTA1-203ENST00000452973 FXNQ16595 210 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 HIST2H2ACQ16777 129 aaPredicted RBP11.35□□□□□ -0.59
VTA1-203ENST00000452973 LRIF1Q5T3J3 769 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 ATG9BQ674R7 924 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 ANKRD34AQ69YU3 496 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 HIST2H2AA3Q6FI13 130 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 CES5AQ6NT32 575 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 TTC33Q6PID6 262 aaPredicted RBP11.35□□□□□ -0.59
VTA1-203ENST00000452973 NUDT18Q6ZVK8 323 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 FAM124AQ86V42 546 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 METTL25Q8N6Q8 603 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 TSPAN14Q8NG11 270 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 SLC5A11Q8WWX8 675 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 RMND5BQ96G75 393 aaPredicted RBP11.35□□□□□ -0.59
VTA1-203ENST00000452973 MKRN2Q9H000 416 aaKnown RBP11.35□□□□□ -0.59
VTA1-203ENST00000452973 GORASP2Q9H8Y8 452 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 NTN4Q9HB63 628 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 TRPV4Q9HBA0 871 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 SPASTQ9UBP0 616 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 TAC3Q9UHF0 121 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 PCM1Q15154 2024 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 KNL1Q8NG31 2342 aa11.35□□□□□ -0.59
VTA1-203ENST00000452973 E2F6O75461 281 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 EPN2O95208 641 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 ACADLP28330 430 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 AQP1P29972 269 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 MAPK9P45984 424 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 WNT3P56703 355 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 SRSF11Q05519 484 aaKnown RBP11.34□□□□□ -0.59
VTA1-203ENST00000452973 NADK2Q4G0N4 442 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 IRAK1BP1Q5VVH5 260 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 DHRSXQ8N5I4 330 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 WDR48Q8TAF3 677 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 RAB7BQ96AH8 199 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 RAD51AP1Q96B01 352 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 NMD3Q96D46 503 aaKnown RBP11.34□□□□□ -0.59
VTA1-203ENST00000452973 OR52A5Q9H2C5 316 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 SMURF2Q9HAU4 748 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 OLAHQ9NV23 265 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 FBXL12Q9NXK8 326 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 OBP2AQ9NY56 170 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 SMPD3Q9NY59 655 aaPredicted RBP11.34□□□□□ -0.59
VTA1-203ENST00000452973 AP1G1O43747 822 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 KLK1P06870 262 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 PRAMEF14Q5SWL7 426 aa11.34□□□□□ -0.59
VTA1-203ENST00000452973 PRAMEF13Q5VWM6 474 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms