RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 CDK13Q14004 1512 aaKnown RBP1.59□□□□□ -2.16
LRCH3-209ENST00000452660 UMODL1Q5DID0 1318 aa1.59□□□□□ -2.16
LRCH3-209ENST00000452660 NWD1Q149M9 1564 aa1.59□□□□□ -2.16
LRCH3-209ENST00000452660 DNMT1P26358 1616 aaKnown RBP1.58□□□□□ -2.16
LRCH3-209ENST00000452660 FAM135BQ49AJ0 1406 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 SHPRHQ149N8 1683 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 IGHV3-20A0A0C4DH32 117 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 F5H0A9 414 aaPredicted RBP1.58□□□□□ -2.16
LRCH3-209ENST00000452660 HDAC3O15379 428 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 PHF1O43189 567 aaPredicted RBP1.58□□□□□ -2.16
LRCH3-209ENST00000452660 PAPSS1O43252 624 aaPredicted RBP1.58□□□□□ -2.16
LRCH3-209ENST00000452660 MTRF1O75570 445 aaKnown RBP1.58□□□□□ -2.16
LRCH3-209ENST00000452660 PRDM1O75626 825 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 DANCRP0C864 163 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 LMO2P25791 158 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 TM4SF1P30408 202 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 PKLRP30613 574 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 SUOXP51687 545 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 ZNF415Q09FC8 603 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 MAMLD1Q13495 774 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 TRA2AQ13595 282 aaKnown RBP eCLIP1.58□□□□□ -2.16
LRCH3-209ENST00000452660 ZRSR2Q15696 482 aaKnown RBP1.58□□□□□ -2.16
LRCH3-209ENST00000452660 EXT1Q16394 746 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 UPP1Q16831 310 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 C2orf83Q53S99 150 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 GARNL3Q5VVW2 1013 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 CEP57Q86XR8 500 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 OR4N5Q8IXE1 308 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 CD177Q8N6Q3 437 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 OR7A2PQ8NGA2 310 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 ATL1Q8WXF7 558 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 SLAMF9Q96A28 289 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 MS4A10Q96PG2 267 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 SEC62Q99442 399 aaKnown RBP1.58□□□□□ -2.16
LRCH3-209ENST00000452660 SDHCQ99643 169 aaPredicted RBP1.58□□□□□ -2.16
LRCH3-209ENST00000452660 HNRNPABQ99729 332 aaKnown RBP1.58□□□□□ -2.16
LRCH3-209ENST00000452660 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.58□□□□□ -2.16
LRCH3-209ENST00000452660 DPP3Q9NY33 737 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 CORO1CQ9ULV4 474 aaPredicted RBP1.58□□□□□ -2.16
LRCH3-209ENST00000452660 SYNMO15061 1565 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 KDM5CP41229 1560 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 NRKQ7Z2Y5 1582 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 IGSF1Q8N6C5 1336 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 ABCA9Q8IUA7 1624 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.58□□□□□ -2.16
LRCH3-209ENST00000452660 IQGAP1P46940 1657 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 MYOM1P52179 1685 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 CLTCQ00610 1675 aaKnown RBP1.58□□□□□ -2.16
LRCH3-209ENST00000452660 ITSN2Q9NZM3 1697 aa1.58□□□□□ -2.16
LRCH3-209ENST00000452660 NPHP4O75161 1426 aaPredicted RBP1.57□□□□□ -2.16
LRCH3-209ENST00000452660 BLMP54132 1417 aaPredicted RBP1.57□□□□□ -2.16
LRCH3-209ENST00000452660 C9orf84Q5VXU9 1444 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 ATP10AO60312 1499 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 NEO1Q92859 1461 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 ZMYM4Q5VZL5 1548 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.57□□□□□ -2.16
LRCH3-209ENST00000452660 DISP1Q96F81 1524 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 LOC100509620A0A075B734 347 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 A0A1W2PQ72 361 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 SLC1A7O00341 560 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 TLX2O43763 284 aaPredicted RBP1.57□□□□□ -2.16
LRCH3-209ENST00000452660 IGHV2-70P01814 119 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 SUPT20HL2P0C7V6 817 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 HAPLN1P10915 354 aaPredicted RBP1.57□□□□□ -2.16
LRCH3-209ENST00000452660 ZNF19P17023 458 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 GJA1P17302 382 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 AADACP22760 399 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 DNA2P51530 1060 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 TMF1P82094 1093 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 FAM189A2Q15884 450 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 ZNF79Q15937 498 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 C15orf59Q2T9L4 293 aaPredicted RBP1.57□□□□□ -2.16
LRCH3-209ENST00000452660 TTC31Q49AM3 519 aaPredicted RBP1.57□□□□□ -2.16
LRCH3-209ENST00000452660 HERC4Q5GLZ8 1057 aaPredicted RBP1.57□□□□□ -2.16
LRCH3-209ENST00000452660 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 AVL9Q8NBF6 648 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 C1orf131Q8NDD1 294 aaKnown RBP1.57□□□□□ -2.16
LRCH3-209ENST00000452660 TDRD7Q8NHU6 1098 aaKnown RBP1.57□□□□□ -2.16
LRCH3-209ENST00000452660 BADQ92934 168 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 C11orf52Q96A22 123 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 PHYHIPLQ96FC7 376 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 C2orf48Q96LS8 159 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 TEX13BQ9BXU2 312 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 SLC39A8Q9C0K1 460 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 ZMYND12Q9H0C1 365 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 OSGEPL1Q9H4B0 414 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 TLE6Q9H808 572 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 PDFQ9HBH1 243 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 WDR90Q96KV7 1748 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 PLCH2O75038 1416 aa1.57□□□□□ -2.16
LRCH3-209ENST00000452660 TNRC18O15417 2968 aaPredicted RBP1.56□□□□□ -2.16
LRCH3-209ENST00000452660 MAP3K1Q13233 1512 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 ERICH3Q5RHP9 1530 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 PDE4DIPQ5VU43 2346 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 DIP2AQ14689 1571 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 ABCA6Q8N139 1617 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 FER1L5A0AVI2 2057 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 ZC3H13Q5T200 1668 aaKnown RBP1.56□□□□□ -2.16
LRCH3-209ENST00000452660 FEZF1A0PJY2 475 aa1.56□□□□□ -2.16
LRCH3-209ENST00000452660 ARHGEF33A8MVX0 844 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms