RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 SLC34A1Q06495 639 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 FGL1Q08830 312 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 DMWDQ09019 674 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 EFEMP1Q12805 493 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 MERTKQ12866 999 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 SLAQ13239 276 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ITGB3BPQ13352 177 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 MRPL49Q13405 166 aaKnown RBP4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 BTG3Q14201 252 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 USF2Q15853 346 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ACKR1Q16570 336 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ME3Q16798 604 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 PCK2Q16822 640 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 TCTN1Q2MV58 587 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 PARP6Q2NL67 630 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 KIF19Q2TAC6 998 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ADPRMQ3LIE5 342 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 AMZ1Q400G9 498 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 TMEM119Q4V9L6 283 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZC2HC1CQ53FD0 456 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 C6orf10Q5SRN2 563 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZDHHC20Q5W0Z9 365 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 TTC23Q5W5X9 447 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZNF772Q68DY9 489 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 SPECC1LQ69YQ0 1117 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 TTC27Q6P3X3 843 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 SCARA5Q6ZMJ2 495 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 C16orf62Q7Z3J2 963 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 GPR142Q7Z601 462 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 TECPR1Q7Z6L1 1165 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ADGRD2Q7Z7M1 963 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 LINC00523Q86TU6 105 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 FJX1Q86VR8 437 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ANKRD46Q86W74 232 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 FAM131BQ86XD5 332 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 MAPKAPK5Q8IW41 473 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 CMTM4Q8IZR5 234 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 TTC9BQ8N6N2 239 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 FNDC5Q8NAU1 212 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZFP28Q8NHY6 868 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ANGPTL6Q8NI99 470 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 WDR20Q8TBZ3 569 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 PIGKQ92643 395 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 TFAP2CQ92754 450 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 KIFAP3Q92845 792 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 IGSF8Q969P0 613 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZC3HAV1LQ96H79 300 aaKnown RBP4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 LRR1Q96L50 414 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZNF48Q96MX3 618 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 CCNL2Q96S94 520 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 NPY6RQ99463 290 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 IDI2Q9BXS1 227 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 MRPL13Q9BYD1 178 aaKnown RBP4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 SNX25Q9H3E2 840 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 PIGMQ9H3S5 423 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 CATSPERBQ9H7T0 1116 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 TBC1D17Q9HA65 648 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZFP14Q9HCL3 533 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 RAB9BQ9NP90 201 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 TUBG2Q9NRH3 451 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 DPP3Q9NY33 737 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ERVK-18Q9QC07 812 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 CTSFQ9UBX1 484 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 RNF24Q9Y225 148 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 SLC22A14Q9Y267 594 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 DMRT1Q9Y5R6 373 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 SLCO1B1Q9Y6L6 691 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 NINLQ9Y2I6 1382 aa4.24□□□□□ -1.73
HMGB3P21-201ENST00000452483 ARHGEF40Q8TER5 1519 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 KANSL1LA0AUZ9 987 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 FAM90A10PA6NDY2 464 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 CBY3A6NI87 242 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZAR1LA6NP61 321 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 WASH3PC4AMC7 463 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 F5H697 171 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 ADAM12O43184 909 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 PSMD3O43242 534 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 LCMT2O60294 686 aaKnown RBP4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 DFFBO76075 338 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 OR5F1O95221 314 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 AKR1A1P14550 325 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 MYL6BP14649 208 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 CD22P20273 847 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 YWHAQP27348 245 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 NMBRP28336 390 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 AXLP30530 894 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 PTGER1P34995 402 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 LIPAP38571 399 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 RPS5P46782 204 aaKnown RBP4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 NUMBP49757 651 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 AGTR2P50052 363 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 MTCP1P56278 107 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 C21orf59P57076 290 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 B2MP61769 119 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 YWHAGP61981 247 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 TXNL4AP83876 142 aaKnown RBP4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 CCZ1BP86790 482 aa4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 CCZ1P86791 482 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P21-201ENST00000452483 ROR2Q01974 943 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms