RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 Q6ZS92 163 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 IGDCC3Q8IVU1 814 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 CISD2Q8N5K1 135 aaKnown RBP12.26□□□□□ -0.45
CHD3-206ENST00000452447 ALKBH8Q96BT7 664 aaKnown RBP12.26□□□□□ -0.45
CHD3-206ENST00000452447 SNRNP40Q96DI7 357 aaKnown RBP12.26□□□□□ -0.45
CHD3-206ENST00000452447 CFAP36Q96G28 342 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 EPS8L2Q9H6S3 715 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 SYNPO2LQ9H987 977 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 ZNF160Q9HCG1 818 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 LRRC4CQ9HCJ2 640 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 MKKSQ9NPJ1 570 aaPredicted RBP12.26□□□□□ -0.45
CHD3-206ENST00000452447 C14orf105Q9NVL8 296 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 ADAMTS6Q9UKP5 1117 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 PDE10AQ9Y233 779 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 SAR1BQ9Y6B6 198 aa12.26□□□□□ -0.45
CHD3-206ENST00000452447 A0A0A6YYC8 382 aaPredicted RBP12.25□□□□□ -0.45
CHD3-206ENST00000452447 NSG1A0A0A6YYJ2 146 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 IDSB3KWA1 339 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 I3L1I5 382 aaPredicted RBP12.25□□□□□ -0.45
CHD3-206ENST00000452447 FFAR3O14843 346 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 SLC16A5O15375 505 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 GPR42O15529 346 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 HPP00738 406 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 HEXBP07686 556 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 CCND1P24385 295 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 IVDP26440 423 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 SLC26A3P40879 764 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 ELK3P41970 407 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 PAFAH1B1P43034 410 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 AVPR1BP47901 424 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 GLRBP48167 497 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 CDKN2DP55273 166 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 IL2P60568 153 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 RPS15AP62244 130 aaKnown RBP12.25□□□□□ -0.45
CHD3-206ENST00000452447 TIAL1Q01085 375 aaKnown RBP eCLIP12.25□□□□□ -0.45
CHD3-206ENST00000452447 HIF1AQ16665 826 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 RBM20Q5T481 1227 aaKnown RBP12.25□□□□□ -0.45
CHD3-206ENST00000452447 TEDDM1Q5T9Z0 273 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 AGTRAPQ6RW13 159 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 GALNT7Q86SF2 657 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 LAPTM4BQ86VI4 370 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 C17orf64Q86WR6 236 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 CREG2Q8IUH2 290 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 GPATCH11Q8N954 259 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 DNAJB14Q8TBM8 379 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 PPP4R1Q8TF05 950 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 C8orf44Q96CB5 159 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 LRRC39Q96DD0 335 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 C19orf60Q96EN9 201 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 LINGO1Q96FE5 620 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 WDR77Q9BQA1 342 aaPredicted RBP12.25□□□□□ -0.45
CHD3-206ENST00000452447 TRIM54Q9BYV2 358 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 ATG10Q9H0Y0 220 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 ASF1BQ9NVP2 202 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 CHMP2BQ9UQN3 213 aa12.25□□□□□ -0.45
CHD3-206ENST00000452447 BLACEA4D250 179 aa12.24□□□□□ -0.45
CHD3-206ENST00000452447 USP27XA6NNY8 438 aa12.24□□□□□ -0.45
CHD3-206ENST00000452447 P2RX6O15547 441 aa12.24□□□□□ -0.45
CHD3-206ENST00000452447 FOXS1O43638 330 aa12.24□□□□□ -0.45
CHD3-206ENST00000452447 GRK3P35626 688 aa12.24□□□□□ -0.45
CHD3-206ENST00000452447 ARL4CP56559 192 aa12.24□□□□□ -0.45
CHD3-206ENST00000452447 MRPL49Q13405 166 aaKnown RBP12.24□□□□□ -0.45
CHD3-206ENST00000452447 NAE1Q13564 534 aa12.24□□□□□ -0.45
CHD3-206ENST00000452447 EIF2S3LQ2VIR3 472 aaKnown RBP12.24□□□□□ -0.45
CHD3-206ENST00000452447 ATG9BQ674R7 924 aa12.24□□□□□ -0.45
CHD3-206ENST00000452447 ISLR2Q6UXK2 745 aa12.24□□□□□ -0.45
CHD3-206ENST00000452447 MBOAT1Q6ZNC8 495 aa12.24□□□□□ -0.45
CHD3-206ENST00000452447 NDUFAF7Q7L592 441 aa12.24□□□□□ -0.45
CHD3-206ENST00000452447 AMER3Q8N944 861 aa12.24□□□□□ -0.45
CHD3-206ENST00000452447 CAMKVQ8NCB2 501 aa12.24□□□□□ -0.45
CHD3-206ENST00000452447 PRR7Q8TB68 274 aa12.24□□□□□ -0.45
CHD3-206ENST00000452447 CNDP1Q96KN2 507 aa12.24□□□□□ -0.45
CHD3-206ENST00000452447 NAPGQ99747 312 aaPredicted RBP12.24□□□□□ -0.45
CHD3-206ENST00000452447 TGIF2Q9GZN2 237 aa12.24□□□□□ -0.45
CHD3-206ENST00000452447 ARL15Q9NXU5 204 aa12.24□□□□□ -0.45
CHD3-206ENST00000452447 SLC17A6Q9P2U8 582 aa12.24□□□□□ -0.45
CHD3-206ENST00000452447 CORO1CQ9ULV4 474 aaPredicted RBP12.24□□□□□ -0.45
CHD3-206ENST00000452447 COPG1Q9Y678 874 aaKnown RBP12.24□□□□□ -0.45
CHD3-206ENST00000452447 KCNE1BA0A087WTH5 132 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 H0YIG0 161 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 CCDC188H7C350 402 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 PCDH17O14917 1159 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 TTI1O43156 1089 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 STATHP02808 62 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 UQCRHP07919 91 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 ITGA8P53708 1063 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 Q0VFX4 171 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 PHKG1Q16816 387 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 HECTD2Q5U5R9 776 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 FAAH2Q6GMR7 532 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 CAPN13Q6MZZ7 669 aaPredicted RBP12.23□□□□□ -0.45
CHD3-206ENST00000452447 FAM45BPQ6NSW5 357 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 HIBCHQ6NVY1 386 aaPredicted RBP12.23□□□□□ -0.45
CHD3-206ENST00000452447 IGFL2Q6UWQ7 119 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 LINC00696Q6ZRV3 163 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 CUZD1Q86UP6 607 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 KBTBD2Q8IY47 623 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 FAM45AQ8TCE6 357 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 THAP11Q96EK4 314 aa12.23□□□□□ -0.45
CHD3-206ENST00000452447 SNF8Q96H20 258 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms