RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 GRTP1Q5TC63 336 aa20.69■□□□□ 0.9
C9orf3-208ENST00000451893 THEMIS2Q5TEJ8 643 aa20.69■□□□□ 0.9
C9orf3-208ENST00000451893 JMJD6Q6NYC1 403 aaPredicted RBP20.69■□□□□ 0.9
C9orf3-208ENST00000451893 MRPL14Q6P1L8 145 aaKnown RBP20.69■□□□□ 0.9
C9orf3-208ENST00000451893 ADCK2Q7Z695 626 aa20.69■□□□□ 0.9
C9orf3-208ENST00000451893 TRABD2AQ86V40 505 aa20.69■□□□□ 0.9
C9orf3-208ENST00000451893 EXOC3L1Q86VI1 746 aa20.69■□□□□ 0.9
C9orf3-208ENST00000451893 FAM26EQ8N5C1 309 aa20.69■□□□□ 0.9
C9orf3-208ENST00000451893 HMGCLL1Q8TB92 370 aa20.69■□□□□ 0.9
C9orf3-208ENST00000451893 ALKBH8Q96BT7 664 aaKnown RBP20.69■□□□□ 0.9
C9orf3-208ENST00000451893 ZBTB9Q96C00 473 aa20.69■□□□□ 0.9
C9orf3-208ENST00000451893 CABS1Q96KC9 395 aa20.69■□□□□ 0.9
C9orf3-208ENST00000451893 YIPF2Q9BWQ6 316 aa20.69■□□□□ 0.9
C9orf3-208ENST00000451893 SOX17Q9H6I2 414 aaPredicted RBP20.69■□□□□ 0.9
C9orf3-208ENST00000451893 C5AR2Q9P296 337 aa20.69■□□□□ 0.9
C9orf3-208ENST00000451893 TXNDC16Q9P2K2 825 aa20.69■□□□□ 0.9
C9orf3-208ENST00000451893 MAU2Q9Y6X3 613 aa20.69■□□□□ 0.9
C9orf3-208ENST00000451893 SETXQ7Z333 2677 aaKnown RBP20.69■□□□□ 0.9
C9orf3-208ENST00000451893 DOPEY2Q9Y3R5 2298 aa20.68■□□□□ 0.9
C9orf3-208ENST00000451893 HYKKA2RU49 373 aa20.68■□□□□ 0.9
C9orf3-208ENST00000451893 ALBP02768 609 aa20.68■□□□□ 0.9
C9orf3-208ENST00000451893 SLC18A1P54219 525 aa20.68■□□□□ 0.9
C9orf3-208ENST00000451893 CTBP1Q13363 440 aa20.68■□□□□ 0.9
C9orf3-208ENST00000451893 FASTKQ14296 549 aaKnown RBP20.68■□□□□ 0.9
C9orf3-208ENST00000451893 MYBPC3Q14896 1274 aa20.68■□□□□ 0.9
C9orf3-208ENST00000451893 SUSD1Q6UWL2 747 aa20.68■□□□□ 0.9
C9orf3-208ENST00000451893 OVCH1Q7RTY7 1134 aa20.68■□□□□ 0.9
C9orf3-208ENST00000451893 KCNMB4Q86W47 210 aa20.68■□□□□ 0.9
C9orf3-208ENST00000451893 CNTN4Q8IWV2 1026 aa20.68■□□□□ 0.9
C9orf3-208ENST00000451893 RERGQ96A58 199 aaPredicted RBP20.68■□□□□ 0.9
C9orf3-208ENST00000451893 SMAD5Q99717 465 aaKnown RBP20.68■□□□□ 0.9
C9orf3-208ENST00000451893 ZFYVE21Q9BQ24 234 aa20.68■□□□□ 0.9
C9orf3-208ENST00000451893 TRIM56Q9BRZ2 755 aaKnown RBP20.68■□□□□ 0.9
C9orf3-208ENST00000451893 FAM167BQ9BTA0 163 aa20.68■□□□□ 0.9
C9orf3-208ENST00000451893 DPH7Q9BTV6 452 aa20.68■□□□□ 0.9
C9orf3-208ENST00000451893 ILKAPQ9H0C8 392 aaPredicted RBP20.68■□□□□ 0.9
C9orf3-208ENST00000451893 SMYD2Q9NRG4 433 aa20.68■□□□□ 0.9
C9orf3-208ENST00000451893 ANKMY1Q9P2S6 941 aa20.68■□□□□ 0.9
C9orf3-208ENST00000451893 TBK1Q9UHD2 729 aa20.68■□□□□ 0.9
C9orf3-208ENST00000451893 NUP210LQ5VU65 1888 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 ARHGEF33A8MVX0 844 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 CXorf49A8MYA2 514 aaPredicted RBP20.67■□□□□ 0.9
C9orf3-208ENST00000451893 MATN4O95460 622 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 GP5P40197 560 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 OR1D4P47884 311 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 CD97P48960 835 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 FOXL2P58012 376 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 ARHGAP19Q14CB8 494 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 EFTUD2Q15029 972 aaKnown RBP eCLIP20.67■□□□□ 0.94e-7■■■■□ 19.4
C9orf3-208ENST00000451893 MUM1Q2TAK8 710 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 TEDDM1Q5T9Z0 273 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 TIFABQ6ZNK6 161 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 SHISA6Q6ZSJ9 500 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 KIAA0408Q6ZU52 694 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 DENND6AQ8IWF6 608 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 CYP4X1Q8N118 509 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 ZADH2Q8N4Q0 377 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 GALNT11Q8NCW6 608 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 PNPLA2Q96AD5 504 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 WDR54Q9H977 334 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 ZNF304Q9HCX3 659 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 CTNNAL1Q9UBT7 734 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 TAC3Q9UHF0 121 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 ADAM21Q9UKJ8 722 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 COMMD10Q9Y6G5 202 aa20.67■□□□□ 0.9
C9orf3-208ENST00000451893 PABPN1LA6NDY0 278 aaKnown RBP20.66■□□□□ 0.9
C9orf3-208ENST00000451893 PRPF4O43172 522 aaKnown RBP eCLIP20.66■□□□□ 0.9
C9orf3-208ENST00000451893 ZBTB14O43829 449 aa20.66■□□□□ 0.9
C9orf3-208ENST00000451893 PRICKLE3O43900 615 aaPredicted RBP20.66■□□□□ 0.9
C9orf3-208ENST00000451893 CTSVO60911 334 aa20.66■□□□□ 0.9
C9orf3-208ENST00000451893 PSIP1O75475 530 aaKnown RBP20.66■□□□□ 0.9
C9orf3-208ENST00000451893 AGFG2O95081 481 aa20.66■□□□□ 0.9
C9orf3-208ENST00000451893 UMODP07911 640 aa20.66■□□□□ 0.9
C9orf3-208ENST00000451893 MMP11P24347 488 aa20.66■□□□□ 0.9
C9orf3-208ENST00000451893 SPRP35270 261 aaPredicted RBP20.66■□□□□ 0.9
C9orf3-208ENST00000451893 SLC1A2P43004 574 aa20.66■□□□□ 0.9
C9orf3-208ENST00000451893 PNLIPRP1P54315 467 aa20.66■□□□□ 0.9
C9orf3-208ENST00000451893 AIMP2Q13155 320 aaKnown RBP20.66■□□□□ 0.9
C9orf3-208ENST00000451893 INPP5JQ15735 1006 aaPredicted RBP20.66■□□□□ 0.9
C9orf3-208ENST00000451893 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.66■□□□□ 0.9
C9orf3-208ENST00000451893 FHL5Q5TD97 284 aa20.66■□□□□ 0.9
C9orf3-208ENST00000451893 SLC6A19Q695T7 634 aa20.66■□□□□ 0.9
C9orf3-208ENST00000451893 FRMPD2BQ6IN97 320 aa20.66■□□□□ 0.9
C9orf3-208ENST00000451893 UGT3A1Q6NUS8 523 aa20.66■□□□□ 0.9
C9orf3-208ENST00000451893 NEK10Q6ZWH5 1172 aa20.66■□□□□ 0.9
C9orf3-208ENST00000451893 PPP1R32Q7Z5V6 425 aa20.66■□□□□ 0.9
C9orf3-208ENST00000451893 GALNT7Q86SF2 657 aa20.66■□□□□ 0.9
C9orf3-208ENST00000451893 OR2A1Q8NGT9 310 aa20.66■□□□□ 0.9
C9orf3-208ENST00000451893 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.66■□□□□ 0.9
C9orf3-208ENST00000451893 SMC6Q96SB8 1091 aa20.66■□□□□ 0.9
C9orf3-208ENST00000451893 FBXL4Q9UKA2 621 aa20.66■□□□□ 0.9
C9orf3-208ENST00000451893 CNOT3O75175 753 aaKnown RBP20.65■□□□□ 0.9
C9orf3-208ENST00000451893 F7P08709 466 aaPredicted RBP20.65■□□□□ 0.9
C9orf3-208ENST00000451893 ENO3P13929 434 aaPredicted RBP20.65■□□□□ 0.9
C9orf3-208ENST00000451893 FBLP22087 321 aaKnown RBP20.65■□□□□ 0.9
C9orf3-208ENST00000451893 GNLYP22749 145 aa20.65■□□□□ 0.9
C9orf3-208ENST00000451893 HPDP32754 393 aaPredicted RBP20.65■□□□□ 0.9
C9orf3-208ENST00000451893 NKG7Q16617 165 aa20.65■□□□□ 0.9
C9orf3-208ENST00000451893 HSP90AA5PQ58FG0 334 aa20.65■□□□□ 0.9
C9orf3-208ENST00000451893 PRMT9Q6P2P2 845 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms