RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 OSTNP61366 133 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.36□□□□□ -1.07
LSM5-208ENST00000450169 CAMK2GQ13555 558 aaPredicted RBP8.36□□□□□ -1.07
LSM5-208ENST00000450169 GPR68Q15743 365 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 XKR7Q5GH72 579 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 XKR3Q5GH77 459 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 HECTD2Q5U5R9 776 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 OR2T5Q6IEZ7 315 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 MZT2BQ6NZ67 158 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 BMP8AQ7Z5Y6 402 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 C1orf127Q8N9H9 656 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 KCT2Q8NC54 265 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 OR52K2Q8NGK3 314 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 OR10Q1Q8NGQ4 319 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 OR2T29Q8NH02 315 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 GPR152Q8TDT2 470 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 SYTL5Q8TDW5 730 aaPredicted RBP8.36□□□□□ -1.07
LSM5-208ENST00000450169 EDEM1Q92611 657 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 TBC1D20Q96BZ9 403 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 PYURFQ96I23 114 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 C12orf42Q96LP6 360 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 SORCS2Q96PQ0 1159 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 TAAR1Q96RJ0 339 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 MGLLQ99685 303 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 DPCDQ9BVM2 203 aaPredicted RBP8.36□□□□□ -1.07
LSM5-208ENST00000450169 SLC6A16Q9GZN6 736 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 SP110Q9HB58 689 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 EXOSC4Q9NPD3 245 aaKnown RBP8.36□□□□□ -1.07
LSM5-208ENST00000450169 SNTG1Q9NSN8 517 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 CD274Q9NZQ7 290 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 NLKQ9UBE8 527 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 ZNF490Q9ULM2 529 aaPredicted RBP8.36□□□□□ -1.07
LSM5-208ENST00000450169 ABCG2Q9UNQ0 655 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 BAIAP2Q9UQB8 552 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 PCDHGA6Q9Y5G7 932 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 COL2A1P02458 1487 aaPredicted RBP8.36□□□□□ -1.07
LSM5-208ENST00000450169 BRCA1P38398 1863 aaKnown RBP8.36□□□□□ -1.07
LSM5-208ENST00000450169 WDR81Q562E7 1941 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 FAM240BA0A1B0GVZ2 78 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 ASB14A6NK59 587 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 F8W036 122 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 CA12O43570 354 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 S1PR4O95977 384 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 VIPP01282 170 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 ICAM1P05362 532 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 FCER2P06734 321 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 NPR1P16066 1061 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 IL1RNP18510 177 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 FPR1P21462 350 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 MAGEA2P43356 314 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 HOXA1P49639 335 aaPredicted RBP8.36□□□□□ -1.07
LSM5-208ENST00000450169 AKR1D1P51857 326 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 NUDT6P53370 316 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 SNX16P57768 344 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 ST3GAL4Q11206 333 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 CAPSQ13938 189 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 ZNF169Q14929 603 aaPredicted RBP8.36□□□□□ -1.07
LSM5-208ENST00000450169 MED22Q15528 200 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 SOWAHAQ2M3V2 549 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 CYP27C1Q4G0S4 372 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 ARHGAP17Q68EM7 881 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 TMEM207Q6UWW9 146 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 FAM124AQ86V42 546 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 SAMD14Q8IZD0 417 aaPredicted RBP8.36□□□□□ -1.07
LSM5-208ENST00000450169 C19orf18Q8NEA5 215 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 OR2T11Q8NH01 316 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 SLC9A6Q92581 669 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 NXPE3Q969Y0 559 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 AHCYL2Q96HN2 611 aaKnown RBP8.36□□□□□ -1.07
LSM5-208ENST00000450169 DIRAS2Q96HU8 199 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 HRASLS5Q96KN8 279 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 MARVELD1Q9BSK0 173 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 NIFKQ9BYG3 293 aaKnown RBP8.36□□□□□ -1.07
LSM5-208ENST00000450169 IKZF5Q9H5V7 419 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 RANBP3Q9H6Z4 567 aaPredicted RBP8.36□□□□□ -1.07
LSM5-208ENST00000450169 ABCB9Q9NP78 766 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 SEMA4BQ9NPR2 832 aaPredicted RBP8.36□□□□□ -1.07
LSM5-208ENST00000450169 HPF1Q9NWY4 346 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 TAS2R16Q9NYV7 291 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 FNIP2Q9P278 1114 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 IKZF3Q9UKT9 509 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 TMX2Q9Y320 296 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 KCNMB2Q9Y691 235 aa8.36□□□□□ -1.07
LSM5-208ENST00000450169 ZNF646O15015 1829 aaPredicted RBP8.36□□□□□ -1.07
LSM5-208ENST00000450169 hCG_1807616A0A1W2PRN6 198 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 MROH6A6NGR9 719 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 H3BM21 787 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 DCLK1O15075 740 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 SULT1B1O43704 296 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 PRKAR1AP10644 381 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 SSTR4P31391 388 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 TRIM23P36406 574 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 RPL35P42766 123 aaKnown RBP8.35□□□□□ -1.07
LSM5-208ENST00000450169 TGM4P49221 684 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 LSM11P83369 360 aaKnown RBP eCLIP8.35□□□□□ -1.07
LSM5-208ENST00000450169 EIF4HQ15056 248 aaKnown RBP8.35□□□□□ -1.07
LSM5-208ENST00000450169 DUSP6Q16828 381 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 C6orf136Q5SQH8 315 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 CELF3Q5SZQ8 465 aaKnown RBP8.35□□□□□ -1.07
LSM5-208ENST00000450169 TRIQKQ629K1 86 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms